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2 years, 4 months ago
UK
Different results between Limma and DESEQ2 for Differential Expression Analysis
2 years, 4 months ago
Hong Kong
Non-model organism , CluserProfiler message "No gene can be mapped"
2 years, 4 months ago
MSKCC | New York, NY
Efficiently working with HDF5-backed SingleCellExperiments
2 years, 5 months ago
Jerusalem
How to add a BioConductor package to a Docker image based on rocker/shiny
2 years, 5 months ago
United States
rtacklayer::import.bed silently adds 1 to the start coordinates
2 years, 5 months ago
United Kingdom
Selecting individual samples from tximport and DGE matrix design with missing biological replicate
2 years, 5 months ago
Argentina
different stat and p values when filtering or not by lfc in DESeq2
2 years, 5 months ago
United States
clarification of the way of converting standard error to confidence interval for logFC in DESeq2 result table
2 years, 5 months ago
MSKCC | New York, NY
How to save `SingleCellExperiment` with `DelayedArray` assay(s) in a portable format?
2 years, 5 months ago
MSKCC | New York, NY
Combining multiple MTX (matrix market) files to HDF5 Array format
2 years, 5 months ago
United States
DESeq2 contrasts using all relevant samples vs all samples
2 years, 5 months ago
United States
Bioconductor Core developers group opening
2 years, 5 months ago
Germany, München
how to color specific node or gene symbol from cnetplot ?
2 years, 5 months ago
United States
updated BioC2006 conference scholarship offerings
2 years, 5 months ago
Germany
Density Plot using Noob Normalisation vs Quantile Normalisation
2 years, 6 months ago
WEHI, Melbourne, Australia
`emptyDrops()` calling 'too many' non-empty droplets
2 years, 6 months ago
Zheng Zhou
Which is the best type of data for correlation or survival analysis
2 years, 6 months ago
United States
how to use Rsamtools to parse extra fields from STAR alignment
2 years, 6 months ago
Switzerland
LFQ shiny app from DEP package reports: Error: 'imputeMethods' is not an exported object from 'namespace:MSnbase'
2 years, 6 months ago
United States
Is DESeq2 generating false postives when changing different pre-filtering thresholds?
2 years, 6 months ago
United States
Could it be possible to get an older version of ChIPQC?
2 years, 6 months ago
United States
'Omics data analyst for HPCBio, University of Illinois
2 years, 6 months ago
United States
Error with slingshot slingPseudotime and slingCurveWeights after using fitGAM from tradeSeq
2 years, 6 months ago
South Korea
DESeq2 is renaming gene names and lack of downregulated genes
2 years, 6 months ago
United States
BiocStyle::html_document does not render Glimma plots
2 years, 7 months ago
India
GViz plot coverage for multiple chromosome and multiple samples using BAM files and save them as a single pdf report
2 years, 7 months ago
India
Unable to convert Uniprot ID to Gene IDs using Biomart
2 years, 7 months ago
United States
calculateQCMetrics defunct, how to calculate the quality metrics by perCellQCMetrics
2 years, 7 months ago
Malaysia
Seeking help in multifactor differential gene expression analysis using DESeq2. Can not get significance difference while comparing 3 time factor (0,2 and 4h) with 3 group (1 control, 2 treated)
2 years, 7 months ago
United Kingdom
Confused about the CPM and TMM normalization in edgeR
2 years, 7 months ago
United States
package 'BiocInstaller' is not available (for R version 3.4.4)
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