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2 years, 1 month ago
Spain
Is there any guide for analyzing HTA (Human Transcriptome Array 2.0) microarrays?
2 years, 1 month ago
USA, Los Angeles, USC
DEXSeq errors "Error in scan( line ... did not have 3 elements" and "Error in FUN(X[[i]], ...) : subscript out of bounds" (DEXSeqDataSetFromHTSeq)
2 years, 1 month ago
United States
Trying to generate a pd file for ChAMP from idat files with no array or slide information in file names
2 years, 2 months ago
India
question regarding installation of "enrichplot" with BiocManager
2 years, 2 months ago
United States
Question about making Contrasts for comparisons and assignment of values
2 years, 2 months ago
United States
Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and annotation forge
2 years, 2 months ago
Hong Kong
Questions about non-model organisms gene enrichment analysis
2 years, 2 months ago
United States
How to interpret Histogram of average log2 CPM filtering in EdgeR?
2 years, 2 months ago
Pittsburgh, Pennsylvania, United States…
SV4Vectors DataFrame bug with haven_labelled data
2 years, 2 months ago
United States
Extracting specific comparisons after fitting model in EdgeR
2 years, 2 months ago
United States
Error while reading rsem files in tximport
2 years, 2 months ago
United States
Question on performing filtering by gene expression on a normalized matrix in limma?
2 years, 2 months ago
Palo Alto, CA, USA
normalization of ChIP-seq data by using the spike-ins or by using total library sizes
2 years, 2 months ago
United States
Possibility of using TPM or FPKM values in edgeR for differential expression analysis?
2 years, 2 months ago
India
query regarding error in installation of "goseq" R bioconductor package
2 years, 2 months ago
United States
Quantification of Genes with RSubread::featureCounts() at exon-level vs gene-level?
2 years, 2 months ago
United States
Limma: log2 of TMM values for RNA-Seq Analysis and PlotMDS()?
2 years, 2 months ago
United States
How to process and analyze Total RNA-Seq data?
2 years, 2 months ago
United States
Limma: posterior distribution of error variance
2 years, 3 months ago
WEHI, Melbourne, Australia
Registrations are now open for BioC Asia 2022
2 years, 3 months ago
Canada
Outlier gene counts either killing or driving DEGs with DESeq2. PLEASE HELP.
2 years, 3 months ago
Belgium
plotCounts to visualize variations of a specific genes along conditions
2 years, 3 months ago
Argentina
Fold Change calculation when Batch Effect is present in RNA-seq data (DEseq2)
2 years, 3 months ago
Palo Alto, CA, USA
installation of BioC packages on Mac M1 Monterrey OS
2 years, 4 months ago
United Kingdom
Error when annotating ENSEMBLE transcript IDs from chicken annotation DB
2 years, 4 months ago
Denver, University of Colorado Anschutz…
Caching bam index files using BiocFileCache
2 years, 4 months ago
UK
Different results between Limma and DESEQ2 for Differential Expression Analysis
2 years, 4 months ago
Hong Kong
Non-model organism , CluserProfiler message "No gene can be mapped"
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