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Comment: Installing 'affy' package on MacOS M2 chip
21 months ago
Basti
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799
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Comment:
Comment: Error with AnnotationTrack(gene, name = "Gene Model") part 3 in edX advanced bio
21 months ago
Basti
▴ 780
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733
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Comment:
Comment: I want to convert the go enrichment result to a data frame (tidy data)with two c
21 months ago
Basti
▴ 780
1
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1.4k
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Comment:
Comment: I have problems installing DESeq2 using R4.1.2. It tells me that it is not avail
21 months ago
Basti
▴ 780
1
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0
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632
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Answer:
Answer: Downloading DESeq package manually
21 months ago
Basti
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1.1k
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Comment:
Comment: bitr returning unexpected length of gene IDs after conversion.
21 months ago
Basti
▴ 780
0
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0
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813
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Answer:
Answer: Issue with installation of a package.
21 months ago
Basti
▴ 780
0
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0
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627
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Answer:
Answer: Champ.impute - myLoad not found
21 months ago
Basti
▴ 780
0
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1
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1.3k
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Comment:
Comment: Non-model organism , CluserProfiler message "No gene can be mapped"
21 months ago
Basti
▴ 780
1
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1
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2.5k
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Comment:
Comment: GSEA only returning 1 GO term - unable to map Ensembl IDs with decimals?
21 months ago
Basti
▴ 780
0
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1
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838
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Comment:
Comment: expression data
21 months ago
Basti
▴ 780
2
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1
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780
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Answer:
Answer: data import error
22 months ago
Basti
▴ 780
0
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0
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563
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Answer:
Answer: Differentially expressed genes from Deseq2 have similar counts
22 months ago
Basti
▴ 780
1
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0
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931
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Comment:
Comment: conditional command within GRanges
22 months ago
Basti
▴ 780
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0
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1.4k
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Comment:
Comment: error in function useDataset of biomaRt
23 months ago
Basti
▴ 780
1
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1
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13k
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Comment:
Comment: Install DESeq2
23 months ago
Basti
▴ 780
1
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1
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13k
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Comment:
Comment: Install DESeq2
23 months ago
Basti
▴ 780
0
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1
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13k
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Answer:
Answer: Install DESeq2
23 months ago
Basti
▴ 780
0
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1
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2.4k
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Comment:
Comment: Error with slingshot slingPseudotime and slingCurveWeights after using fitGAM fr
23 months ago
Basti
▴ 780
0
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1
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2.4k
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Comment:
Comment: Error with slingshot slingPseudotime and slingCurveWeights after using fitGAM fr
23 months ago
Basti
▴ 780
1
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1.3k
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Answer:
Answer: I want to know how to analyze TCGA data with maftools.
23 months ago
Basti
▴ 780
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0
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1.1k
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Answer:
Answer: error in champ.SVD() "Error in summary(lm(svd.o$v[, c] ~ PhenoTypes.lv[[f]]))$c
23 months ago
Basti
▴ 780
0
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0
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694
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Comment:
Comment: Regarding Installation of GEOquery
23 months ago
Basti
▴ 780
3
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1
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993
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Answer:
Answer: DESeq2 is renaming gene names and lack of downregulated genes
23 months ago
Basti
▴ 780
0
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1
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2.8k
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Comment:
Comment: DESeq2 different log2FC and p-value filtering parameters results comparison
23 months ago
Basti
▴ 780
0
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1
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2.8k
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Comment:
Comment: DESeq2 different log2FC and p-value filtering parameters results comparison
23 months ago
Basti
▴ 780
0
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1
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2.8k
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Comment:
Comment: DESeq2 different log2FC and p-value filtering parameters results comparison
23 months ago
Basti
▴ 780
0
votes
1
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2.8k
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Answer:
Answer: DESeq2 different log2FC and p-value filtering parameters results comparison
23 months ago
Basti
▴ 780
0
votes
1
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887
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Comment:
Comment: DeSeq2 Matched Analysis
23 months ago
Basti
▴ 780
0
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0
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3.0k
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Comment:
Comment: error in package GenVisR while installing
23 months ago
Basti
▴ 780
0
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1
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887
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Answer:
Answer: DeSeq2 Matched Analysis
23 months ago
Basti
▴ 780
0
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1
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1.1k
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Comment:
Comment: rename phenotypic variables in pData (microarray) or colData (RNA-Seq)
2.0 years ago
Basti
▴ 780
0
votes
0
replies
773
views
Comment:
Comment: Number of rows in DESeq2 output (.csv) is not the same as number of rows in the
2.0 years ago
Basti
▴ 780
0
votes
1
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1.1k
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Comment:
Comment: rename phenotypic variables in pData (microarray) or colData (RNA-Seq)
2.0 years ago
Basti
▴ 780
0
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3
replies
1.3k
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Comment:
Comment: Error while running DESeq2
2.0 years ago
Basti
▴ 780
0
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1
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1.3k
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Comment:
Comment: Error while running DESeq2
2.0 years ago
Basti
▴ 780
0
votes
0
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569
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Answer:
Answer: Error "DESeqDataSetFromMatrix" function not found
2.0 years ago
Basti
▴ 780
0
votes
0
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1.6k
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Comment:
Comment: batchelor correctExperiments() returns Error in eval(subscript, envir = eframe,
2.1 years ago
Basti
▴ 780
1
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0
replies
555
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Answer:
Answer: roughDispEstimate and momentsDispEstimate
2.1 years ago
Basti
▴ 780
1
vote
1
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1.2k
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Answer:
Answer: Error in DESeqDataSetFromMatrix
2.1 years ago
Basti
▴ 780
0
votes
0
replies
971
views
Comment:
Comment: enrichment to common gene
2.1 years ago
Basti
▴ 780
0
votes
0
replies
1.1k
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Answer:
Answer: How do I remove the outlier probes highlighted in the plotSA function of limma
2.1 years ago
Basti
▴ 780
0
votes
1
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906
views
Comment:
Comment: change a column within a DESeq results object
2.1 years ago
Basti
▴ 780
1
vote
1
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946
views
Comment:
Comment: DE genes with zero counts
2.1 years ago
Basti
▴ 780
0
votes
1
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965
views
Comment:
Comment: Controversial DESEQ2 results
2.1 years ago
Basti
▴ 780
0
votes
0
replies
979
views
Answer:
Answer: what is the format of DMPfinder in minfi package
2.1 years ago
Basti
▴ 780
0
votes
1
reply
1.4k
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Comment:
Comment: regression analysis for epic array methylation data using limma
2.1 years ago
Basti
▴ 780
0
votes
1
reply
1.4k
views
Comment:
Comment: regression analysis for epic array methylation data using limma
2.1 years ago
Basti
▴ 780
0
votes
1
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1.4k
views
Answer:
Answer: regression analysis for epic array methylation data using limma
2.1 years ago
Basti
▴ 780
0
votes
0
replies
788
views
Comment:
Comment: scRNASeq reference at a transcript level
2.1 years ago
Basti
▴ 780
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