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408
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Comment: Comment: single excel file containing methylation beta values does not get loaded in ChAM
7 months ago Basti ▴ 780
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0
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560
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Comment: Comment: minfi::read.metharray.exp
9 months ago Basti ▴ 780
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2
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560
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Answer: Answer: minfi::read.metharray.exp
9 months ago Basti ▴ 780
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476
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Comment: Comment: Error in champ.load(): The following specified files do not exist
9 months ago Basti ▴ 780
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1
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1.4k
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Answer: Answer: geneList error in clusterprofiler
9 months ago Basti ▴ 780
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1
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1.1k
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Answer: Answer: Obtaining pheno data from CEL files
10 months ago Basti ▴ 780
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1
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1.1k
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Comment: Comment: EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
12 months ago Basti ▴ 780
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1
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1.1k
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Comment: Comment: EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
12 months ago Basti ▴ 780
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0
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306
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IlluminaHumanMethylation27kanno.ilmn12.hg19 package is mapped to hg18 genome
IlluminaHumanMethylation27kanno.ilmn12.hg19
12 months ago Basti ▴ 780
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1.8k
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Comment: Comment: RNAseq paired-sample differantial expression analysis with many samples
12 months ago Basti ▴ 780
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1.2k
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Comment: Comment: Deleted:No significant MVPs with a BH adjusted P-value below 0.05
14 months ago Basti ▴ 780
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1
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1.2k
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Comment: Comment: Deleted:No significant MVPs with a BH adjusted P-value below 0.05
14 months ago Basti ▴ 780
0
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0
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685
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Comment: Comment: Error in reading my csv file in minfi
14 months ago Basti ▴ 780
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0
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453
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Comment: Comment: Minimum datasets needed for meta analysis
14 months ago Basti ▴ 780
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1
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1.2k
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Comment: Comment: Methylation data analysis
14 months ago Basti ▴ 780
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0
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1.7k
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Answer: Answer: Error when trying to create a heatmap with DESeq2
15 months ago Basti ▴ 780
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1
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618
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Comment: Comment: DESeq2: how could the lower mean abundance treatment show a positive and signifi
15 months ago Basti ▴ 780
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0
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721
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Comment: Comment: Comparing RNASeq data from multiple studies
16 months ago Basti ▴ 780
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0
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1.1k
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Comment: Comment: minfi bumphunter - probe IDs
16 months ago Basti ▴ 780
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1
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1.1k
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Answer: Answer: minfi bumphunter - probe IDs
16 months ago Basti ▴ 780
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0
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817
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Answer: Answer: Create design matrix for differential methylation analysis
16 months ago Basti ▴ 780
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1
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833
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Comment: Comment: DeSeq2 design fails (full model matrix is less than full rank)
16 months ago Basti ▴ 780
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2
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3.6k
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Comment: Comment: Error while preprocessing raw data from methylation array using minfi package
17 months ago Basti ▴ 780
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0
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632
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Answer: Answer: Model matrix not full rank
18 months ago Basti ▴ 780
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0
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757
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Answer: Answer: library(topGO) query
18 months ago Basti ▴ 780
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2
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1.1k
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Comment: Comment: ChAMP trouble reading csv file
18 months ago Basti ▴ 780
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1
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1.1k
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Comment: Comment: Deseq2 Results are different using batch design
18 months ago Basti ▴ 780
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1
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2.7k
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Comment: Comment: Not able to install clusterProfiler
18 months ago Basti ▴ 780
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1
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1.4k
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Answer: Answer: Creating heatmaps with 2 Log Fold Changes in DESEQ2
18 months ago Basti ▴ 780
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0
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3.1k
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Comment: Comment: Error using champ.import
19 months ago Basti ▴ 780
0
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0
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1.4k
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Answer: Answer: DESeq2 design formula
19 months ago Basti ▴ 780
0
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0
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749
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Answer: Answer: plotCounts label each sample
19 months ago Basti ▴ 780
0
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1
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839
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Comment: Comment: msa Installation failed - please help
20 months ago Basti ▴ 780
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0
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1.4k
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Comment: Comment: Batch correction using control probes in EPIC array data
20 months ago Basti ▴ 780
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0
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1.4k
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Comment: Comment: Batch correction using control probes in EPIC array data
20 months ago Basti ▴ 780
0
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0
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844
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Comment: Comment: ageData (minfi pipeline)
20 months ago Basti ▴ 780
1
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1
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1.3k
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Answer: Answer: Problem in running DESeq from expected count data of Transcriptome by Trinity fo
21 months ago Basti ▴ 780
0
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0
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588
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Comment: Comment: Inverted log2foldchange in study?
22 months ago Basti ▴ 780
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1
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974
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Comment: Comment: DRIMseq error for paired sample analysis
22 months ago Basti ▴ 780
0
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0
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640
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Comment: Comment: How to extract proteins from PCs in plot_pca in DEP package
22 months ago Basti ▴ 780
0
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0
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620
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Answer: Answer: deseq2 nested multifactorial analysis
22 months ago Basti ▴ 780
0
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0
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487
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Comment: Comment: How to save primers in a local file with openPrimeR
22 months ago Basti ▴ 780
2
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0
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771
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Comment: Comment: please resolve the issue
23 months ago Basti ▴ 780
1
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0
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1.3k
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Comment: Comment: No enriched GO terms CpGs
23 months ago Basti ▴ 780
1
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0
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1.3k
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Comment: Comment: No enriched GO terms CpGs
23 months ago Basti ▴ 780
0
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2
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1.3k
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Answer: Answer: No enriched GO terms CpGs
23 months ago Basti ▴ 780
1
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1
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4.1k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
23 months ago Basti ▴ 780
1
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0
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1.1k
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Answer: Answer: champ.load IDAT files from subdirectories
23 months ago Basti ▴ 780
0
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2
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4.1k
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Answer: Answer: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
23 months ago Basti ▴ 780
0
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0
replies
2.9k
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Comment: Comment: Problem with universe argument in enrichKEGG
23 months ago Basti ▴ 780
237 results • Page 1 of 5
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