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94
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Comment: Comment: single excel file containing methylation beta values does not get loaded in ChAM
3 days ago Basti ▴ 780
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0
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311
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Comment: Comment: minfi::read.metharray.exp
10 weeks ago Basti ▴ 780
1
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2
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311
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Answer: Answer: minfi::read.metharray.exp
10 weeks ago Basti ▴ 780
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1
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239
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Comment: Comment: Error in champ.load(): The following specified files do not exist
11 weeks ago Basti ▴ 780
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1
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283
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Answer: Answer: geneList error in clusterprofiler
11 weeks ago Basti ▴ 780
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1
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620
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Answer: Answer: Obtaining pheno data from CEL files
3 months ago Basti ▴ 780
1
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1
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647
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Comment: Comment: EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
5 months ago Basti ▴ 780
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1
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647
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Comment: Comment: EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
5 months ago Basti ▴ 780
0
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0
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171
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IlluminaHumanMethylation27kanno.ilmn12.hg19 package is mapped to hg18 genome
IlluminaHumanMethylation27kanno.ilmn12.hg19
5 months ago Basti ▴ 780
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1
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1.2k
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Comment: Comment: RNAseq paired-sample differantial expression analysis with many samples
5 months ago Basti ▴ 780
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0
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767
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Comment: Comment: Deleted:No significant MVPs with a BH adjusted P-value below 0.05
7 months ago Basti ▴ 780
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1
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767
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Comment: Comment: Deleted:No significant MVPs with a BH adjusted P-value below 0.05
7 months ago Basti ▴ 780
0
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0
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415
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Comment: Comment: Error in reading my csv file in minfi
7 months ago Basti ▴ 780
1
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0
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311
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Comment: Comment: Minimum datasets needed for meta analysis
7 months ago Basti ▴ 780
1
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1
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825
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Comment: Comment: Methylation data analysis
7 months ago Basti ▴ 780
0
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0
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936
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Answer: Answer: Error when trying to create a heatmap with DESeq2
8 months ago Basti ▴ 780
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1
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488
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Comment: Comment: DESeq2: how could the lower mean abundance treatment show a positive and signifi
8 months ago Basti ▴ 780
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0
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464
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Comment: Comment: Comparing RNASeq data from multiple studies
9 months ago Basti ▴ 780
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0
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708
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Comment: Comment: minfi bumphunter - probe IDs
9 months ago Basti ▴ 780
0
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1
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708
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Answer: Answer: minfi bumphunter - probe IDs
9 months ago Basti ▴ 780
0
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0
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569
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Answer: Answer: Create design matrix for differential methylation analysis
9 months ago Basti ▴ 780
0
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1
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562
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Comment: Comment: DeSeq2 design fails (full model matrix is less than full rank)
9 months ago Basti ▴ 780
0
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2
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2.3k
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Comment: Comment: Error while preprocessing raw data from methylation array using minfi package
10 months ago Basti ▴ 780
0
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0
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463
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Answer: Answer: Model matrix not full rank
11 months ago Basti ▴ 780
0
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0
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616
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Answer: Answer: library(topGO) query
11 months ago Basti ▴ 780
0
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2
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767
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Comment: Comment: ChAMP trouble reading csv file
11 months ago Basti ▴ 780
0
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1
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829
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Comment: Comment: Deseq2 Results are different using batch design
11 months ago Basti ▴ 780
0
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1
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1.7k
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Comment: Comment: Not able to install clusterProfiler
11 months ago Basti ▴ 780
0
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1
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1000
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Answer: Answer: Creating heatmaps with 2 Log Fold Changes in DESEQ2
11 months ago Basti ▴ 780
0
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0
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2.2k
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Comment: Comment: Error using champ.import
12 months ago Basti ▴ 780
0
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0
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943
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Answer: Answer: DESeq2 design formula
12 months ago Basti ▴ 780
0
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0
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553
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Answer: Answer: plotCounts label each sample
12 months ago Basti ▴ 780
0
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1
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654
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Comment: Comment: msa Installation failed - please help
13 months ago Basti ▴ 780
0
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0
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1.1k
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Comment: Comment: Batch correction using control probes in EPIC array data
13 months ago Basti ▴ 780
0
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0
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1.1k
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Comment: Comment: Batch correction using control probes in EPIC array data
13 months ago Basti ▴ 780
0
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0
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625
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Comment: Comment: ageData (minfi pipeline)
13 months ago Basti ▴ 780
1
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1
reply
1.0k
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Answer: Answer: Problem in running DESeq from expected count data of Transcriptome by Trinity fo
14 months ago Basti ▴ 780
0
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0
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462
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Comment: Comment: Inverted log2foldchange in study?
15 months ago Basti ▴ 780
0
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1
reply
725
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Comment: Comment: DRIMseq error for paired sample analysis
15 months ago Basti ▴ 780
0
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0
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476
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Comment: Comment: How to extract proteins from PCs in plot_pca in DEP package
15 months ago Basti ▴ 780
0
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0
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459
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Answer: Answer: deseq2 nested multifactorial analysis
15 months ago Basti ▴ 780
0
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0
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380
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Comment: Comment: How to save primers in a local file with openPrimeR
15 months ago Basti ▴ 780
2
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0
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584
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Comment: Comment: please resolve the issue
16 months ago Basti ▴ 780
1
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0
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1.1k
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Comment: Comment: No enriched GO terms CpGs
16 months ago Basti ▴ 780
1
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0
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1.1k
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Comment: Comment: No enriched GO terms CpGs
16 months ago Basti ▴ 780
0
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2
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1.1k
views
Answer: Answer: No enriched GO terms CpGs
16 months ago Basti ▴ 780
1
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1
reply
3.1k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
16 months ago Basti ▴ 780
1
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0
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854
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Answer: Answer: champ.load IDAT files from subdirectories
16 months ago Basti ▴ 780
0
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2
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3.1k
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Answer: Answer: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
16 months ago Basti ▴ 780
0
votes
0
replies
2.1k
views
Comment: Comment: Problem with universe argument in enrichKEGG
16 months ago Basti ▴ 780
237 results • Page 1 of 5
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