Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
7
votes
2
replies
2.4k
views
Appropriate explanation of the methodology behind arrayWeights function from limma R package
limma arrayWeights variance sampleQuality microarray
updated 8.9 years ago by ★ 7.9k • written 9.0 years ago by ▴ 830
0
votes
0
replies
1.9k
views
Comment: C: Combination of duplicateCorrelation with arrayWeights to increase power for DE d
8.9 years ago svlachavas ▴ 830
0
votes
0
replies
1.9k
views
Comment: C: Combination of duplicateCorrelation with arrayWeights to increase power for DE d
8.9 years ago svlachavas ▴ 830
4
votes
8
replies
1.9k
views
Combination of duplicateCorrelation with arrayWeights to increase power for DE detection in multilevel experiments
limma duplicatecorrelation arrayweights microarray
updated 8.9 years ago by 51k • written 9.0 years ago by ▴ 830
0
votes
1
reply
2.8k
views
Comment: C: illuminaHumanv4.db : annotation source, and mapping to transcript names
8.9 years ago svlachavas ▴ 830
0
votes
0
replies
1.9k
views
Comment: C: Combination of duplicateCorrelation with arrayWeights to increase power for DE d
8.9 years ago svlachavas ▴ 830
0
votes
2
replies
1.9k
views
Comment: C: Combination of duplicateCorrelation with arrayWeights to increase power for DE d
8.9 years ago svlachavas ▴ 830
1
vote
1
reply
2.8k
views
Answer: A: illuminaHumanv4.db : annotation source, and mapping to transcript names
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
1.7k
views
Comment: C: Possible methodologies of machine learning in R that can assimilate continuous v
9.0 years ago svlachavas ▴ 830
1
vote
2
replies
1.7k
views
Possible methodologies of machine learning in R that can assimilate continuous variables along gene expression data for microarray classification
classification machinelearning microarray multivariate caret
updated 9.0 years ago by ★ 13k • written 9.0 years ago by ▴ 830
0
votes
0
replies
1.6k
views
Possible methodologies for missing value imputation of continuous variables in a data frame in R
missing data missing value imputation impute MICE bioconductor
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
1.3k
views
Possible methodologies for constructing multi-level comparisons in limma
limma paired analysis multiple factor design affymetrix microarrays duplicatecorrelation
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
3.4k
views
Answer: A: Reactome pathway analysis using ReactomePA
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
5.1k
views
Comment: C: Using of limma moderated t-test with "corrected" expression matrix resulting fr
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
5.1k
views
Comment: C: Using of limma moderated t-test with "corrected" expression matrix resulting fr
9.0 years ago svlachavas ▴ 830
18
votes
18
replies
5.1k
views
Using of limma moderated t-test with "corrected" expression matrix resulting from ComBat batch effect correction
limma batch effect ComBat differential gene expression
updated 9.0 years ago by ▴ 850 • written 9.0 years ago by ▴ 830
0
votes
1
reply
5.1k
views
Comment: C: Using of limma moderated t-test with "corrected" expression matrix resulting fr
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
5.1k
views
Comment: C: Using of limma moderated t-test with "corrected" expression matrix resulting fr
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
5.1k
views
Comment: C: Using of limma moderated t-test with "corrected" expression matrix resulting fr
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
5.1k
views
Comment: C: Using of limma moderated t-test with "corrected" expression matrix resulting fr
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
5.1k
views
Answer: A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
9.0 years ago svlachavas ▴ 830
0
votes
2
replies
5.1k
views
Comment: C: Using of limma moderated t-test with "corrected" expression matrix resulting fr
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
8.8k
views
Comment: C: batch effect : comBat or blocking in limma ?
9.0 years ago svlachavas ▴ 830
1
vote
0
replies
8.8k
views
Answer: A: batch effect : comBat or blocking in limma ?
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
1.3k
views
Answer: A: edgeR design matrix
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
1.9k
views
Questions regarding removal and following re-installation of a specific R package using a custom library path
package installation custom library path biocLite bioconductor
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
1.4k
views
Error with R package RontoTools regarding administrator issues downloading updated KEGG data
ROntoTools Rstudio bioconductor administratorIssues pathway analysis
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
1.5k
views
Comment: C: Problem regarding the explanation of log-fold changes of individual coefficients
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
1.5k
views
Comment: C: Problem regarding the explanation of log-fold changes of individual coefficients
9.0 years ago svlachavas ▴ 830
3
votes
4
replies
1.5k
views
Problem regarding the explanation of log-fold changes of individual coefficients in limma after eBayes
limma logfoldchange limma design matrix paired samples affymetrix microarrays
updated 9.0 years ago by ★ 7.9k • written 9.0 years ago by ▴ 830
0
votes
1
reply
1.9k
views
Comment: C: Possible explanations and suggestions corresponding the interprentation of resul
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
1.9k
views
Comment: C: Possible explanations and suggestions corresponding the interprentation of resul
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
1.9k
views
Comment: C: Possible explanations and suggestions corresponding the interprentation of resul
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
1.9k
views
Comment: C: Possible explanations and suggestions corresponding the interprentation of resul
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
1.9k
views
Comment: C: Possible explanations and suggestions corresponding the interprentation of resul
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
1.9k
views
Comment: C: Possible explanations and suggestions corresponding the interprentation of resul
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
1.9k
views
Comment: C: Possible explanations and suggestions corresponding the interprentation of resul
9.0 years ago svlachavas ▴ 830
11
votes
16
replies
1.9k
views
Possible explanations and suggestions corresponding the interprentation of results of limma multifactorial design
limma multifactorial design diagnostic plots affymetrix microarrays
updated 9.0 years ago by 67k • written 9.0 years ago by ▴ 830
0
votes
1
reply
1.9k
views
Comment: C: Possible explanations and suggestions corresponding the interprentation of resul
9.0 years ago svlachavas ▴ 830
0
votes
2
replies
4.0k
views
Answer: A: How to use t.test to select best features out of multiple features?
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
4.0k
views
Comment: C: How to use t.test to select best features out of multiple features?
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
8.5k
views
Comment: C: How to carry out a gene set analysis using custom gene sets?
9.0 years ago svlachavas ▴ 830
0
votes
0
replies
1.3k
views
Possible(validated) methodology implemented in R for integrating and analyzing clinical data with gene expression data in R
data integration clinicaldata gene expression data PET
9.0 years ago svlachavas ▴ 830
0
votes
1
reply
5.7k
views
Comment: C: Update R in Rstudio to specific version 3.2.1 in windows
9.1 years ago svlachavas ▴ 830
0
votes
1
reply
5.7k
views
Comment: C: Update R in Rstudio to specific version 3.2.1 in windows
9.1 years ago svlachavas ▴ 830
2
votes
5
replies
5.7k
views
Update R in Rstudio to specific version 3.2.1 in windows
updateR rstudio Rversion3.2.1
updated 9.1 years ago by ★ 8.2k • written 9.1 years ago by ▴ 830
0
votes
1
reply
8.5k
views
Answer: A: How to carry out a gene set analysis using custom gene sets?
9.1 years ago svlachavas ▴ 830
0
votes
0
replies
3.3k
views
Answer: A: How to use expression set object to select genes using different gene selection
9.1 years ago svlachavas ▴ 830
0
votes
0
replies
1.9k
views
Answer: A: how to merge affy and agilent array
9.1 years ago svlachavas ▴ 830
0
votes
0
replies
2.7k
views
Problem with the colors in the heatmap.2 function and the color key values range
gplots heatmap.2 affymetrix microarrays color key
9.1 years ago svlachavas ▴ 830
532 results • Page 6 of 11
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6