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1
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1
reply
3.6k
views
Answer:
A: ensDbFromGtf error from gtf file downloaded from GENCODE.
7.3 years ago
Johannes Rainer
★ 2.1k
2
votes
0
replies
2.3k
views
Answer:
A: org.Hs.eg.db error same ensembl ID in different genes
7.3 years ago
Johannes Rainer
★ 2.1k
1
vote
0
replies
1.4k
views
News:
ensembl 90 ensembldb EnsDb databases have been added to AnnotationHub
ensemblb
ensembl
AnnotationHub
annotation
News
7.3 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
1.4k
views
Comment:
C: Ensembl 90 has been released
7.4 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
5.3k
views
Comment:
C: EnsemblDb: how to retrieve gene name / description?
7.4 years ago
Johannes Rainer
★ 2.1k
2
votes
1
reply
5.3k
views
Answer:
A: EnsemblDb: how to retrieve gene name / description?
7.4 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
2.0k
views
Comment:
C: errors with makeTxDbFromBiomart
7.4 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
2.0k
views
Answer:
A: errors with makeTxDbFromBiomart
7.4 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
2.0k
views
Comment:
C: errors with makeTxDbFromBiomart
7.4 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
3.5k
views
Comment:
C: BoF "Writing papers in Rmarkdown, BiocStyle... (and books, posters)"
7.4 years ago
Johannes Rainer
★ 2.1k
3
votes
0
replies
2.0k
views
Answer:
A: Is it possible to get Ensembl gene descriptions with ensembldb?
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
2.7k
views
Comment:
C: ensembldb salmon deseq2 txt2import right tool?
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
1.8k
views
Comment:
C: BiocParallel: messages shown only when processes finished
7.6 years ago
Johannes Rainer
★ 2.1k
5
votes
5
replies
1.8k
views
BiocParallel: messages shown only when processes finished
biocparallel
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
Johannes Rainer
★ 2.1k
0
votes
1
reply
2.7k
views
Comment:
C: ensembldb salmon deseq2 txt2import right tool?
7.6 years ago
Johannes Rainer
★ 2.1k
1
vote
1
reply
2.7k
views
Answer:
A: ensembldb salmon deseq2 txt2import right tool?
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
3.1k
views
Comment:
C: BiocParallel::bplapply() performance with MulticoreParam() is worse than mclappl
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
4.1k
views
Comment:
C: biomaRt - Error in getBM: The query to the BioMart webservice returned an invali
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
4.1k
views
Comment:
C: biomaRt - Error in getBM: The query to the BioMart webservice returned an invali
7.6 years ago
Johannes Rainer
★ 2.1k
1
vote
2
replies
4.1k
views
Answer:
A: biomaRt - Error in getBM: The query to the BioMart webservice returned an invali
7.6 years ago
Johannes Rainer
★ 2.1k
2
votes
0
replies
2.0k
views
Answer:
A: Is it possible to get Ensembl gene descriptions with ensembldb?
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
2.2k
views
Comment:
C: Errror cummeRbund installation
7.6 years ago
Johannes Rainer
★ 2.1k
2
votes
1
reply
3.1k
views
Answer:
A: Is mapId supposed to concatenate multiVals?
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
3.1k
views
Comment:
C: Is mapId supposed to concatenate multiVals?
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
2.4k
views
Comment:
C: keys() fails on EnsDb.Hsapiens.v75 on Bioc 3.5
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
2.4k
views
Answer:
A: keys() fails on EnsDb.Hsapiens.v75 on Bioc 3.5
7.6 years ago
Johannes Rainer
★ 2.1k
1
vote
1
reply
2.4k
views
Comment:
C: keys() fails on EnsDb.Hsapiens.v75 on Bioc 3.5
7.6 years ago
Johannes Rainer
★ 2.1k
1
vote
1
reply
2.4k
views
Comment:
C: keys() fails on EnsDb.Hsapiens.v75 on Bioc 3.5
7.6 years ago
Johannes Rainer
★ 2.1k
1
vote
2
replies
2.4k
views
Answer:
A: keys() fails on EnsDb.Hsapiens.v75 on Bioc 3.5
7.6 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
2.7k
views
Comment:
C: mzR (2.8.1) Rcpp (0.12.10) compiler linker issue in Bioconductor 3.4, R 3.3.3
7.7 years ago
Johannes Rainer
★ 2.1k
1
vote
1
reply
2.7k
views
Comment:
C: mzR (2.8.1) Rcpp (0.12.10) compiler linker issue in Bioconductor 3.4, R 3.3.3
7.7 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
2.0k
views
Answer:
A: New to mass spec data analysis
7.8 years ago
Johannes Rainer
★ 2.1k
4
votes
1
reply
2.4k
views
Answer:
A: Problem running dexseq in parallel using BiocParallel
7.8 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
5.1k
views
Comment:
C: Annotating DEseq output using AnnotationDbi mapIds and most results say NA
7.9 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
3.5k
views
Comment:
C: Getting errors with makeTxDbFromBiomart
7.9 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
3.5k
views
Comment:
C: Getting errors with makeTxDbFromBiomart
7.9 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
3.5k
views
Comment:
C: Getting errors with makeTxDbFromBiomart
7.9 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
3.5k
views
Answer:
A: Getting errors with makeTxDbFromBiomart
7.9 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
1.6k
views
Comment:
C: mismatch between AnnotationHub ensembl v71 hsapiens and direct download using rt
8.0 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
1.6k
views
Comment:
C: mismatch between AnnotationHub ensembl v71 hsapiens and direct download using rt
8.0 years ago
Johannes Rainer
★ 2.1k
1
vote
1
reply
1.6k
views
Answer:
A: Programatically download correct genome wide annotation package for given organi
8.0 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
2.6k
views
Comment:
C: Can XCMS output continuum/profile data to netCDF format?
8.0 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
3.1k
views
Answer:
A: Gviz: AlignmentsTrack from a bam file with non-UCSC chromosome names
8.0 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
5.1k
views
Comment:
C: Annotating DEseq output using AnnotationDbi mapIds and most results say NA
8.0 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
5.1k
views
Comment:
C: Annotating DEseq output using AnnotationDbi mapIds and most results say NA
8.0 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
2.6k
views
Comment:
C: Can XCMS output continuum/profile data to netCDF format?
8.1 years ago
Johannes Rainer
★ 2.1k
1
vote
0
replies
1.4k
views
Answer:
A: xcms warning message
8.1 years ago
Johannes Rainer
★ 2.1k
0
votes
0
replies
1.4k
views
Comment:
C: error when reading .mzML with xcms::xcmsSet
8.1 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
2.6k
views
Comment:
C: Can XCMS output continuum/profile data to netCDF format?
8.1 years ago
Johannes Rainer
★ 2.1k
1
vote
1
reply
2.6k
views
Answer:
A: Can XCMS output continuum/profile data to netCDF format?
8.1 years ago
Johannes Rainer
★ 2.1k
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