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1
vote
1
reply
2.9k
views
Comment:
C: how to extract read alignments from reads aligning in mulitple locations
7.6 years ago
Dario Strbenac
★ 1.5k
3
votes
1
reply
2.9k
views
Answer:
A: how to extract read alignments from reads aligning in mulitple locations
7.6 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.0k
views
Vertically Flipped Sashimi Plot
Gviz
Sashimi Plot
7.6 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.9k
views
Answer:
A: How to get treatment information with TCGAbiolinks?
7.6 years ago
Dario Strbenac
★ 1.5k
1
vote
7
replies
2.9k
views
Mapping Probes to a Genome
BSgenome
biostrings
probe mapping
updated 7.8 years ago by
holgerbrandl
▴ 10 • written 8.4 years ago by
Dario Strbenac
★ 1.5k
1
vote
1
reply
1.2k
views
Most Efficient Application of Voom to Regularly Increasing Study
limma
voom
Batch Effect Correction
updated 7.8 years ago by
Aaron Lun
★ 28k • written 7.8 years ago by
Dario Strbenac
★ 1.5k
4
votes
3
replies
1.5k
views
plotMDS Input Feature Filtering
edgeR
Exploratory Data Analysis
updated 7.9 years ago by
Gordon Smyth
52k • written 7.9 years ago by
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.5k
views
Comment:
C: plotMDS Input Feature Filtering
7.9 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
11k
views
Comment:
C: threshold to filter lowly expressed genes
7.9 years ago
Dario Strbenac
★ 1.5k
0
votes
1
reply
11k
views
Comment:
C: threshold to filter lowly expressed genes
7.9 years ago
Dario Strbenac
★ 1.5k
1
vote
0
replies
3.6k
views
Comment:
C: Importing Gene Symbols with makeTxDbFromGFF
7.9 years ago
Dario Strbenac
★ 1.5k
9
votes
3
replies
3.6k
views
Importing Gene Symbols with makeTxDbFromGFF
GenomicFeatures
GFF3
updated 7.9 years ago by
Valerie Obenchain
★ 6.8k • written 7.9 years ago by
Dario Strbenac
★ 1.5k
1
vote
0
replies
1.6k
views
Comment:
C: TCGAbiolinks query error
8.0 years ago
Dario Strbenac
★ 1.5k
1
vote
1
reply
1.1k
views
Comment:
C: Match Pattern Vector to Subject Vector
8.2 years ago
Dario Strbenac
★ 1.5k
1
vote
3
replies
1.1k
views
Match Pattern Vector to Subject Vector
Biostings
Biostrings
updated 8.2 years ago by
Martin Morgan
25k • written 8.2 years ago by
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.5k
views
Comment:
C: findSpliceOverlaps Buffer Error
8.2 years ago
Dario Strbenac
★ 1.5k
0
votes
1
reply
1.5k
views
Comment:
C: findSpliceOverlaps Buffer Error
8.2 years ago
Dario Strbenac
★ 1.5k
0
votes
1
reply
1.5k
views
Comment:
C: findSpliceOverlaps Buffer Error
8.2 years ago
Dario Strbenac
★ 1.5k
0
votes
1
reply
1.5k
views
Comment:
C: findSpliceOverlaps Buffer Error
8.2 years ago
Dario Strbenac
★ 1.5k
3
votes
8
replies
1.5k
views
findSpliceOverlaps Buffer Error
GenomicAlignments
findSpliceOverlaps
updated 8.2 years ago by
Hervé Pagès
16k • written 8.2 years ago by
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.2k
views
Comment:
C: GDCPrepare function returns a function
8.2 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
870
views
Comment:
C: Class for Storing Chimeric Reads
8.3 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
3.3k
views
Comment:
C: featureCounts Parameters for Exon Junctions
8.3 years ago
Dario Strbenac
★ 1.5k
2
votes
2
replies
870
views
Class for Storing Chimeric Reads
GenomicAlignments
chimeric
updated 8.3 years ago by
Valerie Obenchain
★ 6.8k • written 8.3 years ago by
Dario Strbenac
★ 1.5k
2
votes
2
replies
3.3k
views
featureCounts Parameters for Exon Junctions
rsubread
featureCounts
updated 8.3 years ago by
Wei Shi
★ 3.6k • written 8.3 years ago by
Dario Strbenac
★ 1.5k
0
votes
0
replies
3.2k
views
Comment:
C: TxDb.Hsapiens.UCSC.hg19.knownGene misannotation of a gene
8.3 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
2.0k
views
Comment:
C: miRNA Probe IDs
8.3 years ago
Dario Strbenac
★ 1.5k
2
votes
1
reply
2.0k
views
Answer:
A: miRNA Probe IDs
8.3 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.2k
views
Comment:
C: How to analyze unannotated lncRNA using RNA-seq data?
8.3 years ago
Dario Strbenac
★ 1.5k
1
vote
0
replies
2.4k
views
Answer:
A: Comparison of Column of AnnotatedDataFrame
8.4 years ago
Dario Strbenac
★ 1.5k
6
votes
13
replies
2.4k
views
Comparison of Column of AnnotatedDataFrame
biobase
AnnotatedDataFrame
8.4 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
2.4k
views
Comment:
C: Comparison of Column of AnnotatedDataFrame
8.4 years ago
Dario Strbenac
★ 1.5k
0
votes
3
replies
2.4k
views
Comment:
C: Comparison of Column of AnnotatedDataFrame
8.4 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.7k
views
Comment:
C: Counting Distinct Mapped Reads in BAM File of Paired-end Sequencing
8.4 years ago
Dario Strbenac
★ 1.5k
1
vote
2
replies
1.7k
views
Counting Distinct Mapped Reads in BAM File of Paired-end Sequencing
rsamtools
paired-end reads
countbam
updated 8.4 years ago by
Martin Morgan
25k • written 8.4 years ago by
Dario Strbenac
★ 1.5k
0
votes
0
replies
938
views
Inconsistent Missing Values When Importing GFF3
rtracklayer
NA
8.4 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
2.9k
views
Comment:
C: Mapping Probes to a Genome
8.4 years ago
Dario Strbenac
★ 1.5k
0
votes
2
replies
2.9k
views
Comment:
C: Mapping Probes to a Genome
8.4 years ago
Dario Strbenac
★ 1.5k
3
votes
2
replies
1.1k
views
select With Regular Expression
annotationdbi
Wildcard
updated 8.6 years ago by
Johannes Rainer
★ 2.1k • written 8.6 years ago by
Dario Strbenac
★ 1.5k
0
votes
2
replies
1.7k
views
Comment:
C: biomaRt not working?
8.6 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.7k
views
Comment:
C: biomaRt not working?
8.6 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.8k
views
Answer:
A: RNAseq outlier is a critical sample
8.7 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.3k
views
Comment:
C: Constellation Map from the Broad?
8.7 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
2.4k
views
Answer:
A: Help with toGRanges
8.9 years ago
Dario Strbenac
★ 1.5k
0
votes
1
reply
905
views
Answer:
A: Agilent cgh data read and normalized
8.9 years ago
Dario Strbenac
★ 1.5k
0
votes
1
reply
1.9k
views
Comment:
C: Warning About isobar Incorrect Calculation And Lack of Maintenance
8.9 years ago
Dario Strbenac
★ 1.5k
4
votes
5
replies
1.9k
views
Warning About isobar Incorrect Calculation And Lack of Maintenance
isobar
Shovelware
updated 8.9 years ago by
florian.bw
▴ 20 • written 9.3 years ago by
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.0k
views
Comment:
C: [bug report] som documentation contains incorrect formula
8.9 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.3k
views
Inappropriate Statistical Models for Agilent microRNA Microarray Data
agimicrorna
linear model
8.9 years ago
Dario Strbenac
★ 1.5k
4
votes
1
reply
1.9k
views
Converting Protein Accessions Into Protein Symbols
uniprot
uniprot.ws
8.9 years ago
Dario Strbenac
★ 1.5k
281 results • Page
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