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Comment:
C: MEDIPS: Output appears to be truncated
9.7 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.5k
views
Answer:
A: Non-CpG Methylation in MEDIPS Package
9.7 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.9k
views
Answer:
A: MEDIPS: Output appears to be truncated
9.7 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.9k
views
Answer:
A: MEDIPS quality control
10.1 years ago
Lukas Chavez
▴ 570
1
vote
0
replies
1.6k
views
Answer:
A: MEDIPS: Export rms values as Wiggle for visualization in UCSC
10.1 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
2.8k
views
Answer:
Re: MEDIPS: how does MEDIPS define a methylated region / cluster?
10.2 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
2.8k
views
Answer:
MEDIPS: how does MEDIPS define a methylated region / cluster?
10.2 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
2.8k
views
Comment:
C: MEDIPS: how does MEDIPS define a methylated region / cluster?
10.2 years ago
Lukas Chavez
▴ 570
0
votes
2
replies
2.8k
views
Answer:
A: MEDIPS: how does MEDIPS define a methylated region / cluster?
10.2 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
2.2k
views
Answer:
A: How does MEDIPS handle multiple mapping of a read
10.3 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
2.2k
views
Comment:
C: How does MEDIPS handle multiple mapping of a read
10.3 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.5k
views
Answer:
A: non-CpG methylated regions and strand information in MEDIPS output
10.3 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.8k
views
Answer:
A: mr.edgeR tests in MEDIPS package
10.5 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
2.2k
views
Answer:
A: It works! RE: So close, but still error: RE: Rsamtools filtering bam file: RE: M
10.6 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.9k
views
Answer:
A: So close, but still error: RE: Rsamtools filtering bam file: RE: MEDIPS.createSe
10.7 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
2.1k
views
Comment:
C: Rsamtools filtering bam file: RE: MEDIPS.createSet error
10.7 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
2.1k
views
Comment:
C: Rsamtools filtering bam file: RE: MEDIPS.createSet error
10.7 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.3k
views
Answer:
A: MEDIPS.createSet error
10.7 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
2.3k
views
Answer:
A: MEDIPS.createSet error
10.7 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
2.0k
views
Answer:
A: [MEDIPS] Error in 1:max_signal_index : argument of length 0 - what does mean?
10.9 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.6k
views
Answer:
A: Aha: different error may be a clue: RE: separate MEDIPS.createSet required for e
10.9 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.9k
views
Comment:
C: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
10.9 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.9k
views
Answer:
A: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
10.9 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.5k
views
Comment:
C: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
10.9 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.5k
views
Answer:
A: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
10.9 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.4k
views
Answer:
A: using custom BSgenome with MEDIPS
10.9 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.2k
views
Answer:
A: Question about MEDIPS extend parameter
11.0 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.3k
views
Answer:
A: MEDIPS rms normalization by input
11.1 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.4k
views
Answer:
A: MEDIPS
11.1 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
3.0k
views
Comment:
C: MEDIPS, GRanges, IRanges error processing BAM file
11.3 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
3.0k
views
Answer:
A: MEDIPS, GRanges, IRanges error processing BAM file
11.3 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.2k
views
Answer:
A: MEDIPS no longer producing AMS values
11.3 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.3k
views
Comment:
C: I need BSgenome for Eucalyptus grandis
11.3 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.8k
views
Comment:
C: MEDIPS error extending reads
11.6 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.8k
views
Comment:
C: MEDIPS error extending reads
11.6 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.8k
views
Comment:
C: MEDIPS error extending reads
11.6 years ago
Lukas Chavez
▴ 570
0
votes
1
reply
1.8k
views
Answer:
A: MEDIPS error extending reads
11.6 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.3k
views
Answer:
A: MEDIPS
11.7 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.4k
views
Answer:
A: Segfault in MEDIPS MEDIPS.methylProfiling() with ROI file
11.7 years ago
Lukas Chavez
▴ 570
0
votes
0
replies
1.3k
views
Comment:
C: Fwd: Segfault in MEDIPS MEDIPS.methylProfiling() with ROI file
11.8 years ago
Lukas Chavez
▴ 570
0
votes
2
replies
1.3k
views
Fwd: Segfault in MEDIPS MEDIPS.methylProfiling() with ROI file
Microarray
Preprocessing
BSgenome
BSgenome
MEDIPS
Microarray
Preprocessing
BSgenome
MEDIPS
updated 11.8 years ago by
Stephen Turner
▴ 290 • written 11.8 years ago by
Lukas Chavez
▴ 570
0
votes
0
replies
1.6k
views
Comment:
C: MEDIPS
11.8 years ago
Lukas Chavez
▴ 570
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