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0
votes
1
reply
1.1k
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Answer:
A: Limma, model with several factors
11.4 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.3k
views
Comment:
C: PAM: Applying published classifiers
11.4 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
1.3k
views
Comment:
C: PAM: Applying published classifiers
11.4 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.3k
views
Comment:
C: (no subject)
11.4 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
1.3k
views
Comment:
C: (no subject)
11.4 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
1.4k
views
Answer:
A: DESeq Normalization Question
11.4 years ago
Ryan C. Thompson
★ 7.9k
0
votes
2
replies
3.0k
views
Answer:
A: Analyzing technical replicates with DESeq2
11.4 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
3.0k
views
Answer:
A: summarizeOverlaps mode ignoring inter feature overlaps
11.5 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
2.2k
views
Answer:
A: Question on unbalanced paired design
11.5 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
2.5k
views
Comment:
C: Testing for no change in RNA-seq data?
11.5 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
2.5k
views
Comment:
C: Testing for no change in RNA-seq data?
11.5 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
2.5k
views
Comment:
C: Testing for no change in RNA-seq data?
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
2.5k
views
Comment:
C: Testing for no change in RNA-seq data?
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
17
replies
2.5k
views
Testing for no change in RNA-seq data?
limma
limma
updated 11.6 years ago by
Simon Anders
★ 3.8k • written 11.6 years ago by
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
2.5k
views
Comment:
C: Testing for no change in RNA-seq data?
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
3
replies
2.0k
views
edgeR Quasi-likelihood with tagwise dispersion?
edgeR
edgeR
updated 11.6 years ago by
Gordon Smyth
51k • written 11.6 years ago by
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
2.0k
views
Comment:
C: edgeR Quasi-likelihood with tagwise dispersion?
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.9k
views
Comment:
C: edgeR for data combined from different studies and/or platforms
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
2
replies
1.9k
views
Answer:
A: edgeR for data combined from different studies and/or platforms
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.6k
views
Comment:
C: Difference between EdgeR and DeSeq in library normalization
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
2.3k
views
Comment:
C: yieldSize and paired end data in SummarizeOverlaps error?
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
2.3k
views
Comment:
C: yieldSize and paired end data in SummarizeOverlaps error?
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.0k
views
Comment:
C: time course analyses Illumina RNA-seq data
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
3.3k
views
Answer:
A: DESeq2
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
2.0k
views
Answer:
A: anova like test in edgeR
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
3.2k
views
Answer:
A: edgeR: paired samples DGE and GLM
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.8k
views
Comment:
C: QuasiSeq vs DSS
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
1.8k
views
Answer:
A: QuasiSeq vs DSS
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
2.0k
views
Answer:
A: anova like test in edgeR
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
3.0k
views
Answer:
A: edgeR design matrix and contrast questions
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
3.0k
views
Answer:
A: edgeR design matrix and contrast questions
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
3.0k
views
Answer:
A: multi-mapped reads: Cufflinks + baySeq? edgeR?
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
756
views
Comment:
C: annotationTools: character vector clean-up
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
756
views
Answer:
A: annotationTools: character vector clean-up
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.6k
views
Answer:
A: Normalization
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.6k
views
Comment:
C: Normalization
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
1.6k
views
Comment:
C: Normalization
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
1.6k
views
Answer:
A: Normalization
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.6k
views
Answer:
A: Normalization
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.7k
views
Comment:
C: What happened to GenomicFeatures::spliceGraph?
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
1.7k
views
Comment:
C: What happened to GenomicFeatures::spliceGraph?
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
6
replies
1.7k
views
What happened to GenomicFeatures::spliceGraph?
GenomicFeatures
GenomicFeatures
updated 11.6 years ago by
Tim Triche
★ 4.2k • written 11.6 years ago by
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
720
views
Answer:
A: package LIMMA design matrix for my experiment
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
902
views
Finding genes with minimal expression across a set of conditions?
ASSIGN
ASSIGN
11.6 years ago
Ryan C. Thompson
★ 7.9k
0
votes
1
reply
946
views
Comment:
C: Using summarizeOverlaps with multiple samples/readgroups in a single bam file?
11.7 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
7.9k
views
Answer:
A: edgeR logFC
11.7 years ago
Ryan C. Thompson
★ 7.9k
0
votes
3
replies
946
views
Using summarizeOverlaps with multiple samples/readgroups in a single bam file?
updated 11.7 years ago by
Martin Morgan
25k • written 11.7 years ago by
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
1.8k
views
Comment:
C: limma, voom, weights: factorial versus nested interaction results
11.7 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
585
views
Answer:
A: detailed analysis process of \"Comparisons Both Between
11.7 years ago
Ryan C. Thompson
★ 7.9k
0
votes
0
replies
940
views
Answer:
A: detailed analysis process of \"Comparisons Both Between and Within Subjects\" of
11.7 years ago
Ryan C. Thompson
★ 7.9k
819 results • Page
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