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Answer: Answer: Integration of Single Cell Experiments with batchelor::fastMNN
7 weeks ago Peter Hickey ▴ 740
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Comment: Comment: modelGeneVarByPoisson error selecting bandwidth automatically
5 months ago Peter Hickey ▴ 740
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592
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Comment: Comment: modelGeneVarByPoisson error selecting bandwidth automatically
5 months ago Peter Hickey ▴ 740
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592
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Answer: Answer: modelGeneVarByPoisson error selecting bandwidth automatically
5 months ago Peter Hickey ▴ 740
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News: Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
Asia BioCAsia Conferences Events BioC
written 2.1 years ago by ▴ 740
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Comment: Comment: Memory errors using read.bismark?
7 months ago Peter Hickey ▴ 740
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Comment: Comment: Memory errors using read.bismark?
8 months ago Peter Hickey ▴ 740
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Answer: Answer: Memory errors using read.bismark?
8 months ago Peter Hickey ▴ 740
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712
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Comment: Comment: Reading huge bismark coverage files using bbseq::read.bismark
8 months ago Peter Hickey ▴ 740
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Answer: Answer: Reading huge bismark coverage files using bbseq::read.bismark
8 months ago Peter Hickey ▴ 740
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Comment: Comment: Memory errors using read.bismark?
8 months ago Peter Hickey ▴ 740
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Answer: Answer: Memory errors using read.bismark?
8 months ago Peter Hickey ▴ 740
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576
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Job: Bioinformatics Spatial Omics and Proteomics Postdoc (Research Officer / Senior Research Officer) at WEHI (Melbourne, Australia)
Proteomics JobPosting SingleCell Spatial SpatialExperiment
9 months ago Peter Hickey ▴ 740
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1.1k
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Answer: Answer: plotUMAP Gene Set Faceted
10 months ago Peter Hickey ▴ 740
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1.1k
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Answer: Answer: Trouble generating a dendrogram with colored gene modules using WGCNA for large
12 months ago Peter Hickey ▴ 740
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1.8k
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Answer: Answer: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label
12 months ago Peter Hickey ▴ 740
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1.8k
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Comment: Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label
12 months ago Peter Hickey ▴ 740
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522
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Answer: Answer: SingleR Book Not Found
12 months ago Peter Hickey ▴ 740
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1.7k
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Answer: Answer: error message when I use the bsseq read.bismark command to read a genome wide cy
15 months ago Peter Hickey ▴ 740
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1.7k
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Comment: Comment: error message when I use the bsseq read.bismark command to read a genome wide cy
16 months ago Peter Hickey ▴ 740
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9.8k
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Comment: Comment: scran ScoreMarkers throws a warning
18 months ago Peter Hickey ▴ 740
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926
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Job: Bioinformatics Spatial Omics Postdoc (Research Officer / Senior Research Officer) at WEHI (Melbourne, Australia)
SpatialExperiment JobPosting
18 months ago Peter Hickey ▴ 740
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966
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Answer: Answer: Choosing the right lower limit for emptyDrops
19 months ago Peter Hickey ▴ 740
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874
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Job: Bioinformatics Research Assistant at WEHI (Melbourne, Australia)
JobPosting
19 months ago Peter Hickey ▴ 740
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2.9k
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Answer: Answer: Remove certain highly expressing cells from a SCE
19 months ago Peter Hickey ▴ 740
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1.1k
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Answer: Answer: scRNAseq package and cell type annotations
21 months ago Peter Hickey ▴ 740
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997
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Comment: Comment: Single-cell differential expression analysis with multiple samples
21 months ago Peter Hickey ▴ 740
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1.9k
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Comment: Comment: Pseudo-bulk celltype comparison across conditions from multiple-sources
21 months ago Peter Hickey ▴ 740
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997
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Answer: Answer: Single-cell differential expression analysis with multiple samples
21 months ago Peter Hickey ▴ 740
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1.4k
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Comment: Comment: How to perform batch correction on scRNA-seq with confounding plate effects?
21 months ago Peter Hickey ▴ 740
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2
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1.7k
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News: Registrations are now open for BioC Asia 2022
Asia BioCAsia Conferences Events News
2.2 years ago • updated 2.1 years ago Peter Hickey ▴ 740
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1.7k
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Answer: Answer: Registrations are now open for BioC Asia 2022
2.1 years ago Peter Hickey ▴ 740
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1.7k
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Answer: Answer: Registrations are now open for BioC Asia 2022
2.2 years ago • updated 2.1 years ago Peter Hickey ▴ 740
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1.2k
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Comment: Comment: different stat and p values when filtering or not by lfc in DESeq2
2.3 years ago Peter Hickey ▴ 740
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2.4k
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Comment: Comment: read.bismark() ->Error in manager$availability[[as.character(result$node)]] <- T
2.3 years ago Peter Hickey ▴ 740
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1.2k
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Answer: Answer: different stat and p values when filtering or not by lfc in DESeq2
2.3 years ago Peter Hickey ▴ 740
1
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1
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2.4k
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Comment: Comment: read.bismark() ->Error in manager$availability[[as.character(result$node)]] <- T
2.3 years ago Peter Hickey ▴ 740
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0
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1.6k
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Answer: Answer: Extract only dataframes from AnnData objects
2.3 years ago Peter Hickey ▴ 740
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3.2k
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Comment: Comment: `emptyDrops()` calling 'too many' non-empty droplets
2.3 years ago Peter Hickey ▴ 740
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3.2k
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Comment: Comment: `emptyDrops()` calling 'too many' non-empty droplets
2.3 years ago Peter Hickey ▴ 740
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3.2k
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Comment: Comment: `emptyDrops()` calling 'too many' non-empty droplets
2.3 years ago Peter Hickey ▴ 740
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5
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3.2k
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`emptyDrops()` calling 'too many' non-empty droplets
DropletUtils emptyDrops scRNA scRNAseq 10x
2.4 years ago • updated 2.3 years ago Peter Hickey ▴ 740
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2.2k
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Comment: Comment: scater runUMAP
2.7 years ago Peter Hickey ▴ 740
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2.2k
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Answer: Answer: scater runUMAP
2.7 years ago Peter Hickey ▴ 740
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0
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2.2k
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Answer: Answer: Can we use 'SCT normalization' to find anchors and 'LogNormalize' for the integr
2.7 years ago Peter Hickey ▴ 740
2
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1.6k
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Answer: Answer: scuttle:: librarySizeFactors returning non-finite values
2.8 years ago Peter Hickey ▴ 740
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0
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1.1k
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News: BioC Asia Virtual Meeting, 1-4 November 2021
Workshop Asia BioCAsia Conference
3.2 years ago Peter Hickey ▴ 740
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1
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1.1k
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Comment: Comment: what does " * " denote under the strand column of the GRanges object file outpu
3.5 years ago Peter Hickey ▴ 740
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1.5k
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Answer: Answer: Seurat: normalized data in the integrated assay
3.5 years ago Peter Hickey ▴ 740
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2
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1.3k
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Answer: Answer: Bioconductor Release AMI's
3.6 years ago Peter Hickey ▴ 740
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