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GENESIS: error in crossprod
GENESIS
7 months ago Stephanie M. Gogarten ▴ 870
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377
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Answer: Answer: GENESIS: error in crossprod
7 months ago Stephanie M. Gogarten ▴ 870
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0
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650
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Answer: Answer: GENESIS: Can not use GdsGenotypeReader to read a gds file
9 months ago Stephanie M. Gogarten ▴ 870
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0
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579
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Comment: Comment: SKAT-O method using GENESIS, question about range iterator using SeqVarWindowIte
10 months ago Stephanie M. Gogarten ▴ 870
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1
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805
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Answer: Answer: Help for SeqVarData function
13 months ago Stephanie M. Gogarten ▴ 870
1
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0
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998
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Comment: Comment: assocTestSingle output with GxE
15 months ago Stephanie M. Gogarten ▴ 870
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1
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998
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Comment: Comment: assocTestSingle output with GxE
15 months ago Stephanie M. Gogarten ▴ 870
1
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1
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998
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Answer: Answer: assocTestSingle output with GxE
15 months ago Stephanie M. Gogarten ▴ 870
1
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0
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1.1k
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Comment: Comment: Question about GWASTools gdsSubset
20 months ago Stephanie M. Gogarten ▴ 870
1
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1
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1.1k
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Answer: Answer: Question about GWASTools gdsSubset
20 months ago Stephanie M. Gogarten ▴ 870
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0
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1.4k
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Comment: Comment: Add GP values to VCF
20 months ago Stephanie M. Gogarten ▴ 870
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3
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1.4k
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Add GP values to VCF
VariantAnnotation
21 months ago • updated 20 months ago Stephanie M. Gogarten ▴ 870
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1
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1.4k
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Answer: Answer: Add GP values to VCF
21 months ago Stephanie M. Gogarten ▴ 870
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0
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864
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Answer: Answer: kinToMatrix creates an empty matrix (except for diagonal 0.5 values)
23 months ago Stephanie M. Gogarten ▴ 870
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2
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2.8k
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merging VCF files
VariantAnnotation VariantAnnotation VariantAnnotation VariantAnnotation
written 11.7 years ago by ▴ 870
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1
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744
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warning for gsutil_requesterpays when reading from gsutil_pipe
AnVIL
updated 2.5 years ago by 25k • written 2.7 years ago by ▴ 870
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0
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1.2k
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Answer: Answer: How to project a new vector onto PCA space using snpgdsPCA( )?
2.5 years ago Stephanie M. Gogarten ▴ 870
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0
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1.3k
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Answer: Answer: SNP annotation
2.7 years ago Stephanie M. Gogarten ▴ 870
1
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1
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768
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Can I write to "Workspace data" table with the AnVIL package?
AnVIL
updated 2.7 years ago by 25k • written 2.7 years ago by ▴ 870
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0
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1.2k
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Comment: Comment: Error "unauthorized" in avtable_import
2.9 years ago Stephanie M. Gogarten ▴ 870
1
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3
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1.2k
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Error "unauthorized" in avtable_import
AnVIL
2.9 years ago Stephanie M. Gogarten ▴ 870
0
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1
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987
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Approximations to Est and Est.SE in GENESIS
GENESIS
3.8 years ago Stephanie M. Gogarten ▴ 870
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0
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987
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Answer: Answer: Approximations to Est and Est.SE in GENESIS
3.8 years ago Stephanie M. Gogarten ▴ 870
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0
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789
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X chromosome analyses for males in GENESIS
GENESIS
3.9 years ago Stephanie M. Gogarten ▴ 870
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0
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1.6k
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Comment: C: Alternate allele for GENESIS?
4.1 years ago Stephanie M. Gogarten ▴ 870
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0
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1.6k
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Comment: C: Alternate allele for GENESIS?
4.1 years ago Stephanie M. Gogarten ▴ 870
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2
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1.6k
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Answer: A: Alternate allele for GENESIS?
4.1 years ago Stephanie M. Gogarten ▴ 870
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1
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906
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using GENESIS R package with non-human species
genesis gwastools
4.2 years ago Stephanie M. Gogarten ▴ 870
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0
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906
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Answer: A: using GENESIS R package with non-human species
4.2 years ago Stephanie M. Gogarten ▴ 870
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1
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1.1k
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Answer: A: Association testing model in GENESIS
4.2 years ago Stephanie M. Gogarten ▴ 870
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0
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1.3k
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Answer: A: GENESIS multiple gds files
4.3 years ago Stephanie M. Gogarten ▴ 870
1
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0
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1.7k
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Answer: A: How to imports DS field from VCF files with SeqArray seqVCF2GDS()
4.3 years ago Stephanie M. Gogarten ▴ 870
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0
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1.7k
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Comment: C: Why is assocTestMM running with only a fraction of SNPs in genotype data?
4.6 years ago Stephanie M. Gogarten ▴ 870
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0
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1.6k
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Comment: C: GWASTools for analyzing Canine_HD genotyping data
4.6 years ago Stephanie M. Gogarten ▴ 870
0
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1
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1.8k
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Comment: C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
4.6 years ago Stephanie M. Gogarten ▴ 870
0
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1
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1.8k
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Comment: C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
4.6 years ago Stephanie M. Gogarten ▴ 870
0
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1
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1.8k
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Comment: C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
4.6 years ago Stephanie M. Gogarten ▴ 870
0
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1
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1.8k
views
Comment: C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
4.6 years ago Stephanie M. Gogarten ▴ 870
1
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0
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789
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Answer: A: Does GENESIS match scan IDs for genotype and phenotype data?
4.7 years ago Stephanie M. Gogarten ▴ 870
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0
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1.7k
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Answer: A: SeqVarData Error sample.id in sampleData does not match GDS file
4.7 years ago Stephanie M. Gogarten ▴ 870
1
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0
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938
views
Answer: A: Why did the Wald test disappear from GENESIS?
4.9 years ago Stephanie M. Gogarten ▴ 870
2
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1
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938
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Why did the Wald test disappear from GENESIS?
genesis
4.9 years ago Stephanie M. Gogarten ▴ 870
1
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1
reply
1.2k
views
Comment: C: Sporadic missingness with admixmmap
5.0 years ago Stephanie M. Gogarten ▴ 870
1
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0
replies
1.1k
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Answer: A: Calculating the z score from wald test association results in GENESIS
5.0 years ago Stephanie M. Gogarten ▴ 870
0
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1
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1.6k
views
Comment: C: Interpreting the output of score test using GENESIS
5.0 years ago Stephanie M. Gogarten ▴ 870
2
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2
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1.6k
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Answer: A: Interpreting the output of score test using GENESIS
5.0 years ago Stephanie M. Gogarten ▴ 870
1
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1
reply
1.2k
views
Answer: A: Sporadic missingness with admixmmap
5.0 years ago Stephanie M. Gogarten ▴ 870
1
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1
reply
1.4k
views
Answer: A: seqVCF2GDS Error Converting VCF to GDS file
5.1 years ago Stephanie M. Gogarten ▴ 870
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1
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1.3k
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Answer: A: GENESIS: ascertainment in GWAS
5.2 years ago Stephanie M. Gogarten ▴ 870
1
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1
reply
1.7k
views
Comment: C: sample ids not matching when creating SeqVarData object
5.2 years ago Stephanie M. Gogarten ▴ 870
161 results • Page 1 of 4
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