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3
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1
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1.9k
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Answer: A: Genomic features for genomic positions
8.4 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.5k
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Comment: C: Problem with summarizeVariants function (VariantAnnotation) when using a multi-s
8.4 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.5k
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Comment: C: Problem with summarizeVariants function (VariantAnnotation) when using a multi-s
8.4 years ago Valerie Obenchain ★ 6.8k
0
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2
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1.5k
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Comment: C: Problem with summarizeVariants function (VariantAnnotation) when using a multi-s
8.4 years ago Valerie Obenchain ★ 6.8k
0
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1
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1.5k
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Answer: A: Problem with summarizeVariants function (VariantAnnotation) when using a multi-s
8.4 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.0k
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Comment: C: ensemblVEP problem with MySQL database
8.4 years ago Valerie Obenchain ★ 6.8k
0
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0
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3.1k
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Comment: C: Org.db: why a supposed unique key (ID) has multiple entries?
8.5 years ago Valerie Obenchain ★ 6.8k
0
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1
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3.1k
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Comment: C: Org.db: why a supposed unique key (ID) has multiple entries?
8.5 years ago Valerie Obenchain ★ 6.8k
3
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1
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1.8k
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Answer: A: Keep original range by using flank() on a GRanges object.
8.5 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.0k
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Answer: A: Error in updating metadata to local database in AnnotationHub
8.5 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.0k
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Answer: A: VariantAnnotation print malformated vcf
8.5 years ago Valerie Obenchain ★ 6.8k
0
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1
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1.7k
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Comment: C: biomaRt: Wormbase not working
8.5 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.8k
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Answer: A: How to launch a preconfigured Bioconductor AMI session using the free tier with
8.5 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.6k
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Comment: C: bioconductor/release_core:20160630 - BiocInstaller version 3.2 is too old for R
8.6 years ago Valerie Obenchain ★ 6.8k
0
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1
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2.0k
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Answer: A: makeOrgPackageFromNCBI for non model species -> eror in file
8.6 years ago Valerie Obenchain ★ 6.8k
0
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1
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1.7k
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Answer: A: Getting "error: database is corrupt" when using ExperimentHub()
8.6 years ago Valerie Obenchain ★ 6.8k
0
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1
reply
1.3k
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Answer: A: vcf to vranges
8.6 years ago Valerie Obenchain ★ 6.8k
0
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0
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2.0k
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Answer: A: can't install workflow "rnaseqGene" with Bioconductor version3.3
8.6 years ago Valerie Obenchain ★ 6.8k
0
votes
1
reply
923
views
Answer: A: Asking for dataset Chronic Lymphocytic Leukemia
8.6 years ago Valerie Obenchain ★ 6.8k
6
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0
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1.2k
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News: New Package Submission Process
news package submit package News
updated 8.6 years ago by 25k • written 8.6 years ago by ★ 6.8k
0
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1
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1.4k
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Answer: A: Broken AnnotationHub resource (AH21414 | grasp2)
8.7 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.2k
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Answer: A: Error in makeOrganismDbFromBiomart call for Heliconius melpomene (Ensembl Metazo
8.7 years ago Valerie Obenchain ★ 6.8k
1
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1
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1.6k
views
Comment: C: parseCSQToGRanges() : mcols are all factors, despite some numeric fields
8.7 years ago Valerie Obenchain ★ 6.8k
2
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1
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1.5k
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Answer: A: distinguish DataSource from Provider and ProviderVersion in makeTxDbPackage
8.7 years ago Valerie Obenchain ★ 6.8k
0
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0
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4.9k
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Comment: C: Epigenomics RoadMap Project files now accessible via AnnotationHub
8.7 years ago Valerie Obenchain ★ 6.8k
2
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0
replies
1.5k
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Answer: A: AnnotationHub: confusing pValue/qValue for (some) Roadmap records
8.7 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.2k
views
Comment: C: VariantAnnotation dbSNPs strand
8.7 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.2k
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Answer: A: VariantAnnotation dbSNPs strand
8.7 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.5k
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Answer: A: Genome versions of the VcfFiles from AnnotationHub
8.8 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.9k
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Comment: C: VariantAnnotation produces duplicate names
8.8 years ago Valerie Obenchain ★ 6.8k
0
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0
replies
1.6k
views
Answer: A: mapFromTranscripts strand problem
8.8 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.6k
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Comment: C: mapFromTranscripts strand problem
8.8 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.8k
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Answer: A: Duplicated rows in readVcf output
8.8 years ago Valerie Obenchain ★ 6.8k
0
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1
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1.9k
views
Comment: C: VariantAnnotation produces duplicate names
8.8 years ago Valerie Obenchain ★ 6.8k
0
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3
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1.9k
views
Answer: A: VariantAnnotation produces duplicate names
8.8 years ago Valerie Obenchain ★ 6.8k
1
vote
2
replies
2.2k
views
Answer: A: Why does Homo.sapiens import TxDb.Hsapiens.UCSC.hg19.knownGene instead of TxDb.H
8.8 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.5k
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Answer: A: Differential gene expression analysis for GSE62944
8.8 years ago Valerie Obenchain ★ 6.8k
0
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1
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3.9k
views
Comment: C: failed to load 'AnnotationHub' resource
8.8 years ago Valerie Obenchain ★ 6.8k
1
vote
0
replies
2.1k
views
Comment: C: visualing pwm motif on a DNAstring
8.8 years ago Valerie Obenchain ★ 6.8k
2
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1
reply
1.6k
views
Answer: A: Broken AnnotationHub resource (AH25517 | wgEncodeOpenChromDnaseGm12878Pk.narrowP
8.8 years ago Valerie Obenchain ★ 6.8k
1
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0
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4.9k
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Comment: C: GenomicAlignments: Inverting strand when counting using summarizeOverlaps
8.8 years ago Valerie Obenchain ★ 6.8k
1
vote
0
replies
1.6k
views
Comment: C: Broken AnnotationHub resource (AH25517 | wgEncodeOpenChromDnaseGm12878Pk.narrowP
8.8 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.9k
views
Comment: C: SummarizeOverlaps without reference genome ?
8.9 years ago Valerie Obenchain ★ 6.8k
1
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1
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1.9k
views
Answer: A: SummarizeOverlaps without reference genome ?
8.9 years ago Valerie Obenchain ★ 6.8k
0
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0
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1.9k
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Comment: C: summarizeOverlaps on stranded paired end RNAseq data
8.9 years ago Valerie Obenchain ★ 6.8k
0
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1
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1.9k
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Answer: A: Gene symbol annotation not converted for intergenic SNPs with multiple genes
8.9 years ago Valerie Obenchain ★ 6.8k
0
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1
reply
3.9k
views
Comment: C: failed to load 'AnnotationHub' resource
8.9 years ago Valerie Obenchain ★ 6.8k
2
votes
1
reply
2.0k
views
Answer: A: filterVcf by sample id
8.9 years ago Valerie Obenchain ★ 6.8k
0
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1
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1.6k
views
Answer: A: AnnotationHub() returns only one record !?
8.9 years ago Valerie Obenchain ★ 6.8k
1
vote
1
reply
2.5k
views
Comment: C: Minimum overlap for summarizeOverlaps() to call hit
8.9 years ago Valerie Obenchain ★ 6.8k
830 results • Page 4 of 17
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