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Comment: C: deseq for multiple groups with no replicate
13.9 years ago Simon Anders ★ 3.8k
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Answer: A: Using DESeq or EdgeR for Exon Differential Expression Analysis
13.9 years ago Simon Anders ★ 3.8k
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Comment: C: gff files: how to tell if right-open interval convention used?
13.9 years ago Simon Anders ★ 3.8k
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953
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Answer: A: Testing biased microarray data
13.9 years ago Simon Anders ★ 3.8k
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Answer: A: dealing with negative values in illumina
13.9 years ago Simon Anders ★ 3.8k
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Answer: A: DESeq variance stabilisation and clustering
13.9 years ago Simon Anders ★ 3.8k
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706
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Answer: A: GLMs in DESeq
13.9 years ago Simon Anders ★ 3.8k
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Comment: C: unable to install qvalue..
14.0 years ago Simon Anders ★ 3.8k
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Comment: C: unable to install qvalue..
14.0 years ago Simon Anders ★ 3.8k
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4.7k
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Comment: C: unable to install qvalue..
14.0 years ago Simon Anders ★ 3.8k
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Answer: A: duplicate reads in mRNA-Seq
14.0 years ago Simon Anders ★ 3.8k
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1
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Answer: A: working with two factors in DESeq to analyze RNA-seq
14.0 years ago Simon Anders ★ 3.8k
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Comment: C: FC calculation in Limma
14.1 years ago Simon Anders ★ 3.8k
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2.1k
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Answer: A: DESeq: residuals instead of read counts
14.1 years ago Simon Anders ★ 3.8k
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1.1k
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Answer: A: question about DeSeq
14.2 years ago Simon Anders ★ 3.8k
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785
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Answer: A: DESeq questions
14.2 years ago Simon Anders ★ 3.8k
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785
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Answer: A: DESeq questions
14.2 years ago Simon Anders ★ 3.8k
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2.0k
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Comment: C: edgeR and FDR values always equals 1
14.3 years ago Simon Anders ★ 3.8k
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2.0k
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Answer: A: edgeR and FDR values always equals 1
14.3 years ago Simon Anders ★ 3.8k
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1.8k
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Answer: A: a few questions on DESeq
14.3 years ago Simon Anders ★ 3.8k
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902
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Comment: C: AnnotatedDataFrame and cbind
14.3 years ago Simon Anders ★ 3.8k
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2
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902
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AnnotatedDataFrame and cbind
Biobase Biobase
updated 14.3 years ago by 6.7k • written 14.3 years ago by ★ 3.8k
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Answer: A: Outlier detection in DEseq
14.3 years ago Simon Anders ★ 3.8k
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Comment: C: Normalization by DEseq
14.3 years ago Simon Anders ★ 3.8k
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3.9k
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Answer: A: Right skewed histogram of p-values
14.4 years ago Simon Anders ★ 3.8k
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Comment: C: Question about CSAMA10 "Lab-8-RNAseqUseCase.pdf" tutorial on bioconductor websit
14.4 years ago Simon Anders ★ 3.8k
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Answer: A: Using linear models to find differential gene expression (NGS)
14.5 years ago Simon Anders ★ 3.8k
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Answer: A: to know about the reason in results obtained using DESeq and cufflinks
14.5 years ago Simon Anders ★ 3.8k
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1.8k
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Answer: A: to know about the reason in results obtained using DESeq and cufflinks
14.5 years ago Simon Anders ★ 3.8k
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1
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1.6k
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Answer: A: Normalization of polyA RNA-seq?
14.5 years ago Simon Anders ★ 3.8k
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1.2k
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Answer: A: A question on DESeq
14.6 years ago Simon Anders ★ 3.8k
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3.3k
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Comment: C: edgeR normalization factors
14.6 years ago Simon Anders ★ 3.8k
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1.3k
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Answer: A: analysis of differential expression of small RNAs sequences
14.8 years ago Simon Anders ★ 3.8k
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1.2k
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RNAseq expression analysis using DESeq: technical replicates, paired samples
RNASeq DESeq RNASeq DESeq
14.8 years ago Simon Anders ★ 3.8k
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Comment: C: Adjusting contrast in a heatmap
14.8 years ago Simon Anders ★ 3.8k
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1
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4.7k
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Answer: A: ANOVA vs T-TEST vs eBayes
15.0 years ago Simon Anders ★ 3.8k
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1.4k
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Comment: C: variation between cells compared to samples
15.0 years ago Simon Anders ★ 3.8k
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Comment: C: edgeR: Contrast selection
15.2 years ago Simon Anders ★ 3.8k
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6
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2.1k
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edgeR: Contrast selection
edgeR edgeR
updated 15.2 years ago by ★ 6.0k • written 15.2 years ago by ★ 3.8k
389 results • Page 8 of 8
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