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Answer: A: DESeq without replicates, Problem trying to obtain significant hits
12.9 years ago Simon Anders ★ 3.8k
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1.4k
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Comment: C: edgeR i get 377 significant genes where in DESeq i got 0
12.9 years ago Simon Anders ★ 3.8k
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1
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1.2k
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Comment: C: A few Q's on using DEXSeq with mucho data
12.9 years ago Simon Anders ★ 3.8k
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1.2k
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Answer: A: A few Q's on using DEXSeq with mucho data
12.9 years ago Simon Anders ★ 3.8k
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1.7k
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Comment: C: re incomplete analysis in Deseq
12.9 years ago Simon Anders ★ 3.8k
0
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1.4k
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Answer: A: Help with plot comparison
13.0 years ago Simon Anders ★ 3.8k
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0
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1.8k
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Answer: A: number of genes for DESeq analysis
13.0 years ago Simon Anders ★ 3.8k
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3.6k
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Comment: C: how to set library size in DESeq?
13.0 years ago Simon Anders ★ 3.8k
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3.6k
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Answer: A: how to set library size in DESeq?
13.0 years ago Simon Anders ★ 3.8k
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1.6k
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Comment: C: DEXseq: Making exonCountSet object
13.0 years ago Simon Anders ★ 3.8k
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1.6k
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Answer: A: DEXseq: Making exonCountSet object
13.0 years ago Simon Anders ★ 3.8k
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4.0k
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Answer: A: DESeq and transcript-wise analysis
13.0 years ago Simon Anders ★ 3.8k
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1.4k
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Answer: A: DEseq
13.0 years ago Simon Anders ★ 3.8k
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0
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3.6k
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Answer: A: how edgeR control the outliers?
13.1 years ago Simon Anders ★ 3.8k
0
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0
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1.1k
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Answer: A: DESeq: how to get the variance information
13.1 years ago Simon Anders ★ 3.8k
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2.5k
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Answer: A: DESeq for an mRNA-seq time course
13.1 years ago Simon Anders ★ 3.8k
0
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1
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2.1k
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Answer: A: DEXSeq without replicates?
13.2 years ago Simon Anders ★ 3.8k
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0
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1.7k
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Comment: C: deqseq_count and BWA-based SAM files
13.2 years ago Simon Anders ★ 3.8k
0
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1
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1.2k
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Comment: C: help with DESeq
13.2 years ago Simon Anders ★ 3.8k
0
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1
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1.2k
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Answer: A: help with DESeq
13.2 years ago Simon Anders ★ 3.8k
0
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0
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1.5k
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Answer: A: DESeq variance question
13.2 years ago Simon Anders ★ 3.8k
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1.3k
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Answer: A: DESeq gene names under id
13.2 years ago Simon Anders ★ 3.8k
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1.1k
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Comment: C: edgeR on differentially expressed genes with low read counts
13.2 years ago Simon Anders ★ 3.8k
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2.0k
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Answer: A: edgeR - R script - results compared to DESeq
13.2 years ago Simon Anders ★ 3.8k
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1
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1.6k
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Answer: A: Block x Treatment interaction test with DeSeq
13.2 years ago Simon Anders ★ 3.8k
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1
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8.4k
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Answer: A: DESeq adjusted pvalue calculation / filtering data
13.2 years ago Simon Anders ★ 3.8k
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0
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1.1k
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Answer: A: DESeq Error: pobs == ps[kAs[i] + 1] is not TRUE
13.2 years ago Simon Anders ★ 3.8k
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0
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2.2k
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Comment: C: RNAseq expression analysis using DESeq: technical replicates, paired samples
13.3 years ago Simon Anders ★ 3.8k
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1
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2.2k
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Answer: A: RNAseq expression analysis using DESeq: technical replicates, paired samples
13.3 years ago Simon Anders ★ 3.8k
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0
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1.5k
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Comment: C: uneven counts for edgeR
13.3 years ago Simon Anders ★ 3.8k
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1.2k
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Answer: A: DESeq counts normalized option fails
13.4 years ago Simon Anders ★ 3.8k
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0
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1.4k
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Answer: A: questions about DESeq package: estimateSizeFactors() function
13.4 years ago Simon Anders ★ 3.8k
0
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0
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2.6k
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Answer: A: DESEQ problem
13.4 years ago Simon Anders ★ 3.8k
0
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0
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672
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FW: DESeq query regarding rerVarA and resVarB columns
DESeq DESeq
13.4 years ago Simon Anders ★ 3.8k
0
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0
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750
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[Bioc-devel] DEG data analysis
edgeR DESeq edgeR DESeq
13.4 years ago Simon Anders ★ 3.8k
0
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0
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1.1k
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Answer: A: DESeq: nbinomTest question
13.5 years ago Simon Anders ★ 3.8k
0
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0
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989
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DESeq multifactor GLM Error attributed to zero counts (coded as NA) in dataset?
DESeq DESeq
13.5 years ago Simon Anders ★ 3.8k
0
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1
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1.9k
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Comment: C: Where is DEXSeq bioconductor package?
13.5 years ago Simon Anders ★ 3.8k
0
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0
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1.9k
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Comment: C: Where is DEXSeq bioconductor package?
13.5 years ago Simon Anders ★ 3.8k
0
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0
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1.9k
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Answer: A: Where is DEXSeq bioconductor package?
13.5 years ago Simon Anders ★ 3.8k
2
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1
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3.2k
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Answer: A: Nanostring ncounterdata - DESeq
13.6 years ago Simon Anders ★ 3.8k
0
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0
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1.6k
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Answer: A: Where is DEXSeq bioconductor package?
13.6 years ago Simon Anders ★ 3.8k
0
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0
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853
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Answer: A: relations between differentially expressed genes (using DESeq) and correlation c
13.6 years ago Simon Anders ★ 3.8k
0
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0
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2.6k
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Comment: C: Using DESeq with ChIP-seq data
13.6 years ago Simon Anders ★ 3.8k
0
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1
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2.6k
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Comment: C: Using DESeq with ChIP-seq data
13.6 years ago Simon Anders ★ 3.8k
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1
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2.6k
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Answer: A: Using DESeq with ChIP-seq data
13.6 years ago Simon Anders ★ 3.8k
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0
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1.4k
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Answer: A: R package for DGE analysis between multiple RNA-Seq samples
13.6 years ago Simon Anders ★ 3.8k
0
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1
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5.9k
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Answer: A: DESeq -padj
13.7 years ago Simon Anders ★ 3.8k
1
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1
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6.1k
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Answer: A: Filtering out tags with low counts in DESeq and EgdeR?
13.7 years ago Simon Anders ★ 3.8k
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1
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2.1k
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Comment: C: deseq for multiple groups with no replicate
13.9 years ago Simon Anders ★ 3.8k
389 results • Page 7 of 8
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