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Answer: A: filtering
17.6 years ago Jenny Drnevich ★ 2.2k
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2.1k
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Comment: C: GEOquery on rawdata and processed data ?
17.6 years ago Jenny Drnevich ★ 2.2k
0
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1
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1.2k
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Answer: A: Affy normalization with custom chip.
17.7 years ago Jenny Drnevich ★ 2.2k
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2.2k
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Comment: C: problem with duplicateCorrelation and ExpressionSet objects
17.7 years ago Jenny Drnevich ★ 2.2k
0
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2
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2.2k
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Comment: C: problem with duplicateCorrelation and ExpressionSet objects
17.7 years ago Jenny Drnevich ★ 2.2k
0
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0
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2.2k
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Comment: C: problem with duplicateCorrelation and ExpressionSet objects
17.7 years ago Jenny Drnevich ★ 2.2k
0
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9
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2.2k
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problem with duplicateCorrelation and ExpressionSet objects
GO Survival cdf Biobase graph limma gcrma annaffy affyPLM simpleaffy biomaRt Category
updated 17.7 years ago by ★ 7.4k • written 17.7 years ago by ★ 2.2k
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1
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2.2k
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Comment: C: problem with duplicateCorrelation and ExpressionSet objects
17.7 years ago Jenny Drnevich ★ 2.2k
0
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1
reply
325
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problem with duplicateCorrelation and ExpressionSet objects
updated 17.7 years ago by 52k • written 17.7 years ago by ★ 2.2k
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2
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1.1k
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Nimblegen data analysis
GO cdf affy oligo GO cdf affy oligo
updated 17.7 years ago by ▴ 140 • written 17.7 years ago by ★ 2.2k
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0
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1.1k
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Comment: C: workspace filename
17.7 years ago Jenny Drnevich ★ 2.2k
0
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2
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1.0k
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dye effects stronger than dye-swaps?
Microarray Normalization Category Microarray Normalization Category
updated 17.8 years ago by ★ 6.0k • written 17.8 years ago by ★ 2.2k
0
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5
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1.5k
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dye effects stronger than dye-swaps?
Microarray Normalization Microarray Normalization
updated 17.8 years ago by ★ 6.0k • written 17.8 years ago by ★ 2.2k
0
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1
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1.5k
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Comment: C: dye effects stronger than dye-swaps?
17.8 years ago Jenny Drnevich ★ 2.2k
0
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3
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1.4k
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intended behavior of plotPCA and AffyBatch objects?
affy affycoretools affy affycoretools
updated 17.8 years ago by 67k • written 17.8 years ago by ★ 2.2k
0
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1
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1.4k
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Comment: C: intended behavior of plotPCA and AffyBatch objects?
17.8 years ago Jenny Drnevich ★ 2.2k
0
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0
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907
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Comment: C: QC in simpleaffy
17.8 years ago Jenny Drnevich ★ 2.2k
0
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3
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2.1k
views
Can't get RCurl...
GO Survival annotate genefilter affy graph limma GOstats biomaRt Category affycoretools
updated 17.8 years ago by 67k • written 17.8 years ago by ★ 2.2k
0
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1
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2.1k
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Comment: C: Can't get RCurl...
17.8 years ago Jenny Drnevich ★ 2.2k
0
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1
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3.2k
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Answer: A: Filtering by variance, IQR, etc.
17.8 years ago Jenny Drnevich ★ 2.2k
0
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1
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1.2k
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topTable "resort.by" broken...
GO Survival Biobase annotate genefilter affy affydata graph gcrma matchprobes annaffy
updated 17.9 years ago by 52k • written 17.9 years ago by ★ 2.2k
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1
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1.4k
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Comment: C: Nimblegen arrays/Limma package:duplicate correlation and other problems
17.9 years ago Jenny Drnevich ★ 2.2k
0
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0
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1.4k
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Comment: C: Nimblegen arrays/Limma package:duplicate correlation and other problems
17.9 years ago Jenny Drnevich ★ 2.2k
0
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2
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1.4k
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Comment: C: Nimblegen arrays/Limma package:duplicate correlation and other problems
17.9 years ago Jenny Drnevich ★ 2.2k
0
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1
reply
1.5k
views
question about limma2annaffy
GO Survival Biobase annotate genefilter geneplotter affy affydata graph limma annaffy
updated 17.9 years ago by 67k • written 17.9 years ago by ★ 2.2k
0
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1
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1.4k
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Answer: A: Nimblegen arrays/Limma package:duplicate correlation and other problems
17.9 years ago Jenny Drnevich ★ 2.2k
0
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0
replies
1.1k
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Affymetrix promoter arrays
Normalization oligo Normalization oligo
17.9 years ago Jenny Drnevich ★ 2.2k
0
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8
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2.0k
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oligo on R 2.4.1?
GO Survival annotate genefilter affy affydata matchprobes affyQCReport affyio oligo GO
updated 18.0 years ago by ★ 7.4k • written 18.0 years ago by ★ 2.2k
0
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0
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2.0k
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Answer: A: oligo on R 2.4.1?
18.0 years ago Jenny Drnevich ★ 2.2k
0
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2
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2.0k
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Answer: A: oligo on R 2.4.1?
18.0 years ago Jenny Drnevich ★ 2.2k
0
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0
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736
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makePDpackage for tiling arrays
oligo oligo
18.0 years ago Jenny Drnevich ★ 2.2k
0
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0
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1.2k
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Comment: C: AffyQCReport: "I'm sorry, I do not know about chip type" (celeganscdf)
18.0 years ago Jenny Drnevich ★ 2.2k
0
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0
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877
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Bioconductor Digest, Vol 47, Issue 29
limma limma
18.0 years ago Jenny Drnevich ★ 2.2k
0
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2
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1.9k
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suggestions for plotPCA / pca.legend
updated 18.0 years ago by 67k • written 18.1 years ago by ★ 2.2k
0
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0
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1.9k
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Comment: C: suggestions for plotPCA / pca.legend
18.0 years ago Jenny Drnevich ★ 2.2k
0
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0
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928
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questions on BioC's implementation of plier
Normalization plier Normalization plier
18.0 years ago Jenny Drnevich ★ 2.2k
0
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5
replies
1.5k
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continued dye effects, after normalization
Normalization Normalization
18.1 years ago Jenny Drnevich ★ 2.2k
0
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1
reply
1.5k
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Answer: A: continued dye effects, after normalization
18.1 years ago Jenny Drnevich ★ 2.2k
0
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0
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776
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Answer: A: removing outlier/masked probes and gcrma
18.1 years ago Jenny Drnevich ★ 2.2k
0
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0
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470
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Answer: A: limma - reading data from different Print files in cDNA
18.1 years ago Jenny Drnevich ★ 2.2k
0
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0
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1.5k
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Comment: C: continued dye effects, after normalization
18.1 years ago Jenny Drnevich ★ 2.2k
0
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0
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649
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Answer: A: warnings....when treating duplicates
18.1 years ago Jenny Drnevich ★ 2.2k
0
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0
replies
1.5k
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Answer: A: simpleaffy and yeast2cdf problems
18.1 years ago Jenny Drnevich ★ 2.2k
0
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0
replies
649
views
Answer: A: warnings....when treating duplicates
18.1 years ago Jenny Drnevich ★ 2.2k
0
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1
reply
1.7k
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Comment: C: Plate or print-order effects - limma
18.1 years ago Jenny Drnevich ★ 2.2k
0
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2
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1.7k
views
Answer: A: Plate or print-order effects - limma
18.1 years ago Jenny Drnevich ★ 2.2k
0
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0
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568
views
Answer: A: limma - MA
18.1 years ago Jenny Drnevich ★ 2.2k
0
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11
replies
3.0k
views
trouble hacking plotPCA
GO Survival Biobase genefilter affy affydata graph limma gcrma matchprobes affyPLM RBGL
updated 18.1 years ago by ▴ 10 • written 18.1 years ago by ★ 2.2k
0
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0
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3.0k
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Comment: C: trouble hacking plotPCA
18.1 years ago Jenny Drnevich ★ 2.2k
0
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0
replies
1.4k
views
Comment: C: makecdfenv
18.1 years ago Jenny Drnevich ★ 2.2k
222 results • Page 2 of 5
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