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Comment: C: Install CRISPRseek packageand get documentation
7.3 years ago Julie Zhu ★ 4.3k
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Answer: A: Using IRanges to find gene TSS that overlap a window
updated 7.3 years ago by 25k • written 7.3 years ago by ★ 4.3k
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Comment: C: How to find nearest CpG islands around miRNA genes using granges?
7.3 years ago Julie Zhu ★ 4.3k
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Answer: A: How to find nearest CpG islands around miRNA genes using granges?
7.3 years ago Julie Zhu ★ 4.3k
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Comment: C: offTargetAnalysis() Error in weights %*% mismatch.pos : non-conformable argument
7.3 years ago Julie Zhu ★ 4.3k
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1.9k
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Answer: A: offTargetAnalysis() Error in weights %*% mismatch.pos : non-conformable argument
7.3 years ago Julie Zhu ★ 4.3k
0
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Answer: A: "NNG[A|G][A|G]N$" in CRISPRseek code
7.3 years ago Julie Zhu ★ 4.3k
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Answer: A: CRISPRseek How to get a correct result of searchHits2 ?
7.4 years ago Julie Zhu ★ 4.3k
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Comment: C: CRISPRseek with genome not available in BSgenome
7.4 years ago Julie Zhu ★ 4.3k
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Comment: C: CRISPRseek with genome not available in BSgenome
7.4 years ago Julie Zhu ★ 4.3k
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2.0k
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Answer: A: CRISPRseek with genome not available in BSgenome
7.4 years ago Julie Zhu ★ 4.3k
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1
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2.0k
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Comment: C: CRISPRseek with genome not available in BSgenome
7.4 years ago Julie Zhu ★ 4.3k
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1.3k
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Answer: A: CRISPRseek with Doench 2016 scores
7.4 years ago Julie Zhu ★ 4.3k
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1.3k
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Comment: C: CRISPRseek with Doench 2016 scores
7.4 years ago Julie Zhu ★ 4.3k
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Rsamtools fetch MD:Z field from bam files
Rsamtools fetch MD:Z field from bam files
7.4 years ago Julie Zhu ★ 4.3k
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Answer: A: Rsamtools fetch MD:Z field from bam files
7.4 years ago Julie Zhu ★ 4.3k
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1.3k
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Comment: C: Rsamtools fetch MD:Z field from bam files
updated 7.4 years ago by 25k • written 7.4 years ago by ★ 4.3k
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3
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Question about the ChIPpeakAnno:
ChIPchip Annotation AnnotationData ChIPchip Annotation AnnotationData
updated 7.5 years ago by • 0 • written 10.6 years ago by ★ 4.3k
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Comment: C: What are out-of-bound ranges? Is it necessary to get rid of them?
7.6 years ago Julie Zhu ★ 4.3k
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Answer: A: What are out-of-bound ranges? Is it necessary to get rid of them?
7.6 years ago Julie Zhu ★ 4.3k
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Answer: A: tilling sgRNA library design
7.6 years ago Julie Zhu ★ 4.3k
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1.7k
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Comment: C: CRISPRseed gRNA.pattern is not producing expected result
7.7 years ago Julie Zhu ★ 4.3k
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1.7k
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Comment: C: CRISPRseed gRNA.pattern is not producing expected result
7.7 years ago Julie Zhu ★ 4.3k
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1
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1.7k
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Answer: A: CRISPRseed gRNA.pattern is not producing expected result
7.7 years ago Julie Zhu ★ 4.3k
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1
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2.0k
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Answer: A: CRISPRseek with genome not available in BSgenome
7.7 years ago Julie Zhu ★ 4.3k
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1.7k
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Comment: C: CRISPRseek prediction of truncated Nme sgRNA and getting error message
7.7 years ago Julie Zhu ★ 4.3k
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1.7k
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Comment: C: CRISPRseek prediction of truncated Nme sgRNA and getting error message
7.7 years ago Julie Zhu ★ 4.3k
1
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1.2k
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Job: Bioinformatician/Computational Biologist opportunity at the University of Massachusetts Medical School
bioinformatician job Job
7.7 years ago Julie Zhu ★ 4.3k
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Answer: A: CRISPRseek prediction of truncated Nme sgRNA and getting error message
7.7 years ago Julie Zhu ★ 4.3k
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4.2k
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Comment: C: running off target analaysis
7.7 years ago Julie Zhu ★ 4.3k
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
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Comment: C: CRISPRseek scoring clarification
7.8 years ago Julie Zhu ★ 4.3k
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Answer: A: CRISPRseek scoring clarification
7.8 years ago Julie Zhu ★ 4.3k
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
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1
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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1
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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1
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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0
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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1
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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0
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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1
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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1
reply
4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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1
reply
4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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0
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
0
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0
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4.2k
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Comment: C: running off target analaysis
7.8 years ago Julie Zhu ★ 4.3k
1
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1
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3.2k
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Answer: A: ChIPpeakAnno-problem exporting data due to "arguments imply differing number of
8.0 years ago Julie Zhu ★ 4.3k
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2.8k
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Comment: C: problem to load data into ChIPpeakAnno
8.0 years ago Julie Zhu ★ 4.3k
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