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Answer: A: fourCseq - getDifferences and normnalisation
10.1 years ago Wolfgang Huber ★ 13k
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News: Advanced Course: R programming and development 15-16. January 2015 (Thursday-Friday), EMBL Heidelberg
Course News
10.2 years ago • updated 10.1 years ago Wolfgang Huber ★ 13k
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Answer: A: SomaticSignatures, cannot reproduce use case
10.2 years ago Wolfgang Huber ★ 13k
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News: European Bioconductor Developers' Meeting 12th-13th January 2015, Heidelberg
developers workshop conference meeting News
10.2 years ago Wolfgang Huber ★ 13k
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Answer: A: DESeq2 timecourse - How to set the experimental design
10.2 years ago Wolfgang Huber ★ 13k
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9.7k
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Answer: A: DESeq2 timecourse - How to set the experimental design
10.2 years ago Wolfgang Huber ★ 13k
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Job: PI position at EMBL-EBI (Cambridge UK)
Job Sequencing
10.3 years ago Wolfgang Huber ★ 13k
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3.2k
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Answer: A: Interaction categorical/continuous variable DESeq2
10.3 years ago Wolfgang Huber ★ 13k
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1.3k
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Answer: A: Test Statistic in nbinomialTest in DESeq???
10.3 years ago Wolfgang Huber ★ 13k
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2.3k
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Answer: A: Tissue heterogeneity and TMM normalization
10.3 years ago Wolfgang Huber ★ 13k
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Comment: C: RNA-seq differentially expressed gene finding methods
10.3 years ago Wolfgang Huber ★ 13k
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1.8k
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Answer: A: DEXSeq update results change
10.4 years ago Wolfgang Huber ★ 13k
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2.4k
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Answer: A: Error in DESeqDataSetFromHTSeqCount: scan line did not have 2 elements
10.4 years ago Wolfgang Huber ★ 13k
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1
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2.3k
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Answer: A: Help installing 'rhdf5' in an "offline" environment
10.4 years ago Wolfgang Huber ★ 13k
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1.1k
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Answer: A: Query regarding DESeq
10.4 years ago Wolfgang Huber ★ 13k
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1.2k
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Answer: A: Microarray data normalization
10.4 years ago Wolfgang Huber ★ 13k
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Answer: A: selection of probes, probesets mapping to the same gene
10.4 years ago Wolfgang Huber ★ 13k
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1
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3.7k
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Answer: A: [Help for DESeq]: Error in lfproc - newsplit: out of vertex space
10.4 years ago Wolfgang Huber ★ 13k
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2.7k
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Comment: C: failing to filter ExpressionSet object using nsFilter
10.5 years ago Wolfgang Huber ★ 13k
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1.4k
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Answer: A: VSN with spike-in probes question
10.5 years ago Wolfgang Huber ★ 13k
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1.3k
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Answer: A: Problem with removing duplicated probes of datasets without annotation
10.5 years ago Wolfgang Huber ★ 13k
0
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734
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ECCB workshop call for abstracts: "Analysis of Differential Isoform Usage by RNA-seq: Statistical Methodologies and Open Software"
10.5 years ago Wolfgang Huber ★ 13k
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Answer: A: topGO genes associated with GO terms
10.5 years ago Wolfgang Huber ★ 13k
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4
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1.2k
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Warning message while trying to install Bioconductor
updated 10.6 years ago by ★ 6.5k • written 10.6 years ago by ★ 13k
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in-group missing arrayQualityMetrics()
arrayQualityMetrics arrayQualityMetrics
10.6 years ago Wolfgang Huber ★ 13k
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Comment: C: genefilter vs limma - many probes filtered
10.6 years ago Wolfgang Huber ★ 13k
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Comment: C: genefilter vs limma - many probes filtered
10.6 years ago Wolfgang Huber ★ 13k
0
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0
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1.2k
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Course "CSAMA 2014" Computational Statistics for Genome Biology
Annotation Classification Clustering Annotation Classification Clustering
10.6 years ago Wolfgang Huber ★ 13k
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1
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1.3k
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total count filter cutoff
Transcription Transcription
updated 10.6 years ago by ▴ 20 • written 10.6 years ago by ★ 13k
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Answer: A: total count filter cutoff
10.7 years ago Wolfgang Huber ★ 13k
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3.2k
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Comment: C: phyloseq/DESeq gives negative transformed values
10.7 years ago Wolfgang Huber ★ 13k
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1
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1.7k
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Answer: A: MLSeq Mathematical Concepts
10.7 years ago Wolfgang Huber ★ 13k
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1.5k
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Comment: C: svg error in arrayQualityMetrics
10.8 years ago Wolfgang Huber ★ 13k
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1.5k
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Answer: A: svg error in arrayQualityMetrics
10.8 years ago Wolfgang Huber ★ 13k
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Answer: A: VSN after xps with RaGene2.0ST chips - is there a way to keep an identifier?
10.8 years ago Wolfgang Huber ★ 13k
0
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1.3k
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CSAMA 2014: Computational Statistics for Genome Biology - June 22-27, 2014
Sequencing Annotation Classification Clustering Sequencing Annotation Classification
10.8 years ago Wolfgang Huber ★ 13k
0
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1.7k
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Answer: A: Problem with NChannelSet objects using Agilent Data with arrayQualityMetrics pac
10.8 years ago Wolfgang Huber ★ 13k
0
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0
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6.5k
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Comment: C: DESeq2 - regularised log transformation blind or not?
10.8 years ago Wolfgang Huber ★ 13k
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6.5k
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Comment: C: DESeq2 - regularised log transformation blind or not?
10.8 years ago Wolfgang Huber ★ 13k
0
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2
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6.5k
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Answer: A: DESeq2 - regularised log transformation blind or not?
10.8 years ago Wolfgang Huber ★ 13k
0
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0
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1.7k
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Answer: A: Non-specific filtering of Affymetrix Microarray data
10.8 years ago Wolfgang Huber ★ 13k
0
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0
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796
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error in DEXSeq fitDispersionFunction()
GO DEXSeq GO DEXSeq
10.9 years ago Wolfgang Huber ★ 13k
0
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833
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Answer: A: error in DEXSeq fitDispersionFunction()
10.9 years ago Wolfgang Huber ★ 13k
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5.0k
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Comment: C: Problem with exporting graph from plotPCA() in a DESeq2 function
10.9 years ago Wolfgang Huber ★ 13k
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1.1k
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Answer: A: Why nbinomGLMTest in DESeq reports zero p values
10.9 years ago Wolfgang Huber ★ 13k
0
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1
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2.6k
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Answer: A: in-group missing arrayQualityMetrics()
10.9 years ago Wolfgang Huber ★ 13k
0
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1
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1.3k
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Comment: C: obtaining the counts after batch effect removal
10.9 years ago Wolfgang Huber ★ 13k
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1.5k
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Answer: A: Cluster stability/robustness
10.9 years ago Wolfgang Huber ★ 13k
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2.7k
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Comment: C: rhdf5 segfault
11.0 years ago Wolfgang Huber ★ 13k
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1
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2.7k
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Answer: A: rhdf5 segfault
11.0 years ago Wolfgang Huber ★ 13k
1,430 results • Page 6 of 29
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