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Comment: C: By pass dispersion estimation in DESeq2
7.4 years ago Wolfgang Huber ★ 13k
0
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2
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2.2k
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Answer: A: expression matrix with varianceStabilizingTransformation
7.5 years ago Wolfgang Huber ★ 13k
1
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1
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3.7k
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Comment: C: Problem installing rhdf5
7.5 years ago Wolfgang Huber ★ 13k
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1
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3.4k
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Answer: A: function getAE from ArrayExpress needs update because EBI has switched to https
7.5 years ago Wolfgang Huber ★ 13k
0
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0
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1.0k
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Comment: C: DEXSeq - Error in estimateSizeFactorsForMatrix(featureCounts(object)
7.5 years ago Wolfgang Huber ★ 13k
0
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0
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3.9k
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Answer: A: Different PCA plots using rlog and vsd on the same data set
7.5 years ago Wolfgang Huber ★ 13k
0
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0
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1.7k
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Answer: A: phyloseq heatmap blank after multiple package updates
7.6 years ago Wolfgang Huber ★ 13k
0
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1
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2.0k
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Answer: A: Error with DESeqDataSetFromMatrix is not available (for R version 3.4.1)
7.6 years ago Wolfgang Huber ★ 13k
1
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2
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6.0k
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Answer: A: DESeq2: How to manually perform filtering and outlier detection?
7.7 years ago Wolfgang Huber ★ 13k
0
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0
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6.0k
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Comment: C: DESeq2: How to manually perform filtering and outlier detection?
7.7 years ago Wolfgang Huber ★ 13k
0
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0
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3.6k
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Answer: A: Filtering low intensity probes in microarray data
7.7 years ago Wolfgang Huber ★ 13k
6
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12k
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Answer: A: Volcanoplot with limma - RAW P-values or Adj.P-Values
7.7 years ago Wolfgang Huber ★ 13k
6
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1
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3.6k
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Tutorial: BoF "Writing papers in Rmarkdown, BiocStyle... (and books, posters)"
biocstyle Rmarkdown Tutorial
7.7 years ago Wolfgang Huber ★ 13k
1
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2
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4.0k
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Comment: C: markdown is coming to the support site
7.7 years ago Wolfgang Huber ★ 13k
1
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0
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1.6k
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Comment: C: Duplicated author affiliations in BiocStyle-based HTML document
7.7 years ago Wolfgang Huber ★ 13k
0
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0
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1.2k
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Answer: A: FourCSeq - errors in plotZScores
7.7 years ago Wolfgang Huber ★ 13k
0
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0
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8.5k
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Comment: C: DESeq2 installing error: S4Vectors cannot be unloaded; anyone?
7.7 years ago Wolfgang Huber ★ 13k
1
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0
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8.8k
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Comment: C: Error message that there is no package called Biobase
7.7 years ago Wolfgang Huber ★ 13k
0
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0
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1.3k
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Answer: A: name of column in R
7.7 years ago Wolfgang Huber ★ 13k
0
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0
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887
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Answer: A: How to extract a numeric matrix of the raw measurement values from the FCS file?
7.8 years ago Wolfgang Huber ★ 13k
0
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0
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14k
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Comment: C: R: error while reading .h5 files from R using rdhf5 package
7.8 years ago Wolfgang Huber ★ 13k
0
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1
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14k
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Answer: A: R: error while reading .h5 files from R using rdhf5 package
7.8 years ago Wolfgang Huber ★ 13k
0
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0
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1.9k
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Answer: A: Save multiple plots into single pdf from Deseq2 analysis?
7.8 years ago Wolfgang Huber ★ 13k
1
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0
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2.1k
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Comment: C: EBImage cannot read .png images from Image.R
7.8 years ago Wolfgang Huber ★ 13k
0
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1
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1.3k
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Comment: C: find fold change in DESeq2 results
7.8 years ago Wolfgang Huber ★ 13k
2
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0
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5.2k
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Answer: A: Application of Deseq2 to mass spec data
7.8 years ago Wolfgang Huber ★ 13k
0
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0
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2.2k
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Comment: C: Nonspecific filtering of microarray data
7.8 years ago Wolfgang Huber ★ 13k
1
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0
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2.2k
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Answer: A: Nonspecific filtering of microarray data
7.8 years ago Wolfgang Huber ★ 13k
0
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0
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1.5k
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Answer: A: AIC-like measure for DESeq2
7.9 years ago Wolfgang Huber ★ 13k
0
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0
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1.8k
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Answer: C: Found consistent padj values for all the samples in DESeq2 R Package
8.0 years ago Wolfgang Huber ★ 13k
0
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1
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1.6k
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Comment: C: DESeq2::DESeq command hangs at "fitting model and testing" step with no output.
8.0 years ago Wolfgang Huber ★ 13k
0
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0
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1.9k
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Answer: A: Where to find open access microbiome data for case-control comparative study?
8.0 years ago Wolfgang Huber ★ 13k
0
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1
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3.3k
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Comment: C: Error in lfproc(x, y, weights = weights, cens = cens,... : newsplit: out of ver
8.0 years ago Wolfgang Huber ★ 13k
0
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1
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3.3k
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Answer: A: Error in lfproc(x, y, weights = weights, cens = cens,... : newsplit: out of ver
8.0 years ago Wolfgang Huber ★ 13k
2
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0
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1.7k
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Answer: A: Is the VST implemented in DESeq useful on time-series cell differentiation datas
8.0 years ago Wolfgang Huber ★ 13k
0
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0
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3.4k
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Comment: C: Tutorial for RNA-Seq Data Analysis
8.0 years ago Wolfgang Huber ★ 13k
0
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0
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1.7k
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Answer: A: unusal expression level values after normalization in Affymetrix Microarray expe
8.0 years ago Wolfgang Huber ★ 13k
0
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0
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1.2k
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Comment: C: Deseq2 to nanlyse one level / condition
8.0 years ago Wolfgang Huber ★ 13k
3
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1
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1.1k
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Answer: A: statistical tests to show the specificity of a phenomenon (eg increase in H3K27m
8.1 years ago Wolfgang Huber ★ 13k
1
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0
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6.6k
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Comment: C: Error in Gviz | IdeogramTrack
8.1 years ago Wolfgang Huber ★ 13k
1
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1
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6.6k
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Comment: C: Error in Gviz | IdeogramTrack
8.1 years ago Wolfgang Huber ★ 13k
0
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0
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2.5k
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Answer: A: Unable to install DeSeq2 and EdgeR in ubuntu 16.04 , this is what happens when I
8.2 years ago Wolfgang Huber ★ 13k
0
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1
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1.5k
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Answer: A: Bug in vsn2 in package vsn?
8.2 years ago Wolfgang Huber ★ 13k
0
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0
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1.3k
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Answer: A: Questions about SomaticSignatures packages
8.2 years ago Wolfgang Huber ★ 13k
0
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0
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3.0k
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Comment: C: S4Vectors masks/breaks regular Matrix functions
8.2 years ago Wolfgang Huber ★ 13k
2
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0
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1.9k
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News: Ascona Workshop 2017 - Statistical Challenges in Single-Cell Biology: Deadline on 20 January
conference single cell statistical modeling News
8.5 years ago • updated 8.2 years ago Wolfgang Huber ★ 13k
1
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0
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4.0k
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Comment: C: Why does rlog and vst use normalized counts?
8.3 years ago Wolfgang Huber ★ 13k
0
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0
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1.2k
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Job: PhD-level staff position in computational modelling and quantitative biology at EMBL
exciting job modelling Job
8.3 years ago Wolfgang Huber ★ 13k
1
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1
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2.9k
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Answer: A: Best practices for converting adj matrix -> graphNEL
8.3 years ago Wolfgang Huber ★ 13k
0
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0
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1.2k
views
Answer: A: how to change color of points log2foldchange>1
8.3 years ago Wolfgang Huber ★ 13k
1,432 results • Page 3 of 29
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