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0
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682
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Made a pDATA manually for HTqPCR procedure
HTqPCR phenoData esetVis pData
2.9 years ago Marcelo Laia ▴ 450
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532
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Use limma to a non-genomic data
non-genomic quantitative limma
3.4 years ago Marcelo Laia ▴ 450
3
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3
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954
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AnnotationForge run by three days and do not end
annotation AnnotationForge
4.4 years ago Marcelo Laia ▴ 450
1
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0
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954
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Answer: A: AnnotationForge run by three days and do not end
4.4 years ago Marcelo Laia ▴ 450
0
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1
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1.3k
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limma technical replicates and biological replicates in the same design
limma SANTA limma SANTA
updated 5.3 years ago by 51k • written 15.0 years ago by ▴ 450
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1
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975
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Is possible to use NOISeq with counts from RSubread?
noiseq rsubread tophat bowtie bowtie2
5.3 years ago Marcelo Laia ▴ 450
0
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0
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1.4k
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Clustering large dataset
HeatMap Cairo Graphics Device Failed to create Cairo backend seqplots
updated 5.6 years ago by 4.0k • written 5.6 years ago by ▴ 450
1
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2
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1.8k
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qRT-PCR Sample Maximization software analysis and proper experimental design advice
qPCR Sample Maximization Analysis Experimental Design qRT-PCR
updated 9.4 years ago by 51k • written 9.4 years ago by ▴ 450
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1.8k
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Comment: A: qRT-PCR Sample Maximization software analysis and proper experimental design adv
9.4 years ago Marcelo Laia ▴ 450
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1.2k
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Comment: C: timecourse package - Missing data
14.7 years ago Marcelo Laia ▴ 450
0
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2
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1.2k
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timecourse package - Missing data
TimeCourse timecourse TimeCourse timecourse
updated 14.7 years ago by ▴ 440 • written 14.7 years ago by ▴ 450
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1
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3.2k
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Answer: A: problems in installing biomart
14.9 years ago Marcelo Laia ▴ 450
0
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1
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2.1k
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Comment: C: Most stable gene pairs in array experiment
15.0 years ago Marcelo Laia ▴ 450
0
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0
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896
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OFF TOPIC high-density SSU rRNA microarray
Microarray SANTA Microarray SANTA
15.0 years ago Marcelo Laia ▴ 450
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0
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1.0k
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[limma] Possible bug on read.maimages function ?
Annotation limma SANTA Annotation limma SANTA
15.1 years ago Marcelo Laia ▴ 450
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0
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1.5k
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limma Time Course Experiments question
graph limma SANTA graph limma SANTA
15.5 years ago Marcelo Laia ▴ 450
0
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0
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1.1k
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Answer: A: No degree of freedom in maanova
15.6 years ago Marcelo Laia ▴ 450
0
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1
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1.1k
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No degree of freedom in maanova
maanova maanova
15.6 years ago Marcelo Laia ▴ 450
0
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0
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1.8k
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Comment: C: Normalization of bi-modal expression data
15.7 years ago Marcelo Laia ▴ 450
0
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1
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1.2k
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Answer: A: Maanova & createdata
15.9 years ago Marcelo Laia ▴ 450
0
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0
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806
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OFF TOPIC How did we control for or remove background hybridization to the vector backbone ?
Normalization limma Normalization limma
15.9 years ago Marcelo Laia ▴ 450
0
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0
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637
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Categories microarray data in functional profiles
Microarray Annotation GO Category Microarray Annotation GO Category
16.2 years ago Marcelo Laia ▴ 450
0
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1
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772
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Answer: A: Single channel (numerical intensities) data import into BioConductor
16.4 years ago Marcelo Laia ▴ 450
0
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0
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730
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Question about Error in next.fix:(next.fix + ncols - 1) : NA/NaN argument
Genetics Genetics
16.4 years ago Marcelo Laia ▴ 450
0
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0
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1.5k
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Answer: A: MAANOVA - Error in dimnames(x) <- dn : length of 'dimnames' [1] not equal to arr
16.4 years ago Marcelo Laia ▴ 450
0
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0
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1.0k
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Answer: A: MAANOVA - how to collapse replicate spots
16.5 years ago Marcelo Laia ▴ 450
0
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0
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921
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Comment: C: Limma: How to set title for imageplot, plotPrintTipLoess and plotDensities ?
16.5 years ago Marcelo Laia ▴ 450
0
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1
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921
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Answer: A: Limma: How to set title for imageplot, plotPrintTipLoess and plotDensities ?
16.5 years ago Marcelo Laia ▴ 450
0
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0
replies
1.1k
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limma Factorial 2x2x2x4 : Did I a correct parametrization ?
limma limma
16.6 years ago Marcelo Laia ▴ 450
0
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1
reply
1.5k
views
maSigPro Problems in see.genes
updated 16.6 years ago by ▴ 340 • written 16.6 years ago by ▴ 450
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0
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959
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[SOLVED] Factorial experiment: No degree of freedom in maanova
maanova maanova
16.6 years ago Marcelo Laia ▴ 450
0
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0
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1.2k
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Comment: C: Factorial experiment: No degree of freedom in maanova
16.6 years ago Marcelo Laia ▴ 450
0
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1
reply
1.2k
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Comment: C: Factorial experiment: No degree of freedom in maanova
16.6 years ago Marcelo Laia ▴ 450
0
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1
reply
1.2k
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Answer: A: Factorial experiment: No degree of freedom in maanova
16.6 years ago Marcelo Laia ▴ 450
0
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0
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839
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Factorial experiment: No degree of freedom in maanova
maanova maanova
16.6 years ago Marcelo Laia ▴ 450
0
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0
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629
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Help on basic skills on R and maanova
17.2 years ago Marcelo Laia ▴ 450
0
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0
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1.0k
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Answer: A: Needed help on maanova fitmaanova function
17.2 years ago Marcelo Laia ▴ 450
0
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1
reply
1.0k
views
Needed help on maanova fitmaanova function
affy vsn limma maanova affyio affy vsn limma maanova affyio
17.2 years ago Marcelo Laia ▴ 450
0
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1
reply
1.4k
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Comment: C: Extract M values from probes set to cluster
17.7 years ago Marcelo Laia ▴ 450
0
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0
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1.4k
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Comment: C: Extract M values from probes set to cluster
17.7 years ago Marcelo Laia ▴ 450
0
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2
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1.4k
views
Comment: C: Extract M values from probes set to cluster
17.7 years ago Marcelo Laia ▴ 450
0
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7
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1.4k
views
Extract M values from probes set to cluster
updated 17.7 years ago by 21k • written 17.7 years ago by ▴ 450
0
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4
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1.5k
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cluster a set of genes based on another set of genes
Organism limma Organism limma
updated 17.7 years ago by ▴ 280 • written 17.7 years ago by ▴ 450
0
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2
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1.2k
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Time course cDNA two color array analysis
TimeCourse limma timecourse maSigPro TimeCourse limma timecourse maSigPro
17.7 years ago Marcelo Laia ▴ 450
0
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0
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1.2k
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Answer: A: Time course cDNA two color array analysis
17.7 years ago Marcelo Laia ▴ 450
0
votes
1
reply
845
views
Spot duplicate in timecourse package and "missing" values
TimeCourse limma timecourse TimeCourse limma timecourse
updated 17.7 years ago by ▴ 440 • written 17.7 years ago by ▴ 450
0
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2
replies
687
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help in normalization cDNA arrays
updated 17.7 years ago by ★ 1.9k • written 17.7 years ago by ▴ 450
0
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0
replies
746
views
[limma] Error: nestedF method can't handle NA p-values
17.7 years ago Marcelo Laia ▴ 450
0
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0
replies
917
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Advice on how to compare two different sources on cDNA
limma weaver limma weaver
17.7 years ago Marcelo Laia ▴ 450
0
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0
replies
1.8k
views
Comment: C: Rgraphviz problem
17.7 years ago Marcelo Laia ▴ 450
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