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3.0k
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How does Limma calculate the log2 fold change?
limma
updated 8.0 years ago by 52k • written 18.9 years ago by ▴ 630
0
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1
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1.5k
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Comment: C: xps: hugene11 chip gives problems
12.2 years ago Groot, Philip de ▴ 630
0
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4
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1.5k
views
xps: hugene11 chip gives problems
Microarray Annotation xps Microarray Annotation xps
updated 12.2 years ago by ★ 3.9k • written 12.2 years ago by ▴ 630
0
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0
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1.3k
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Answer: A: CDF file for Mouse Gene 1.1 ST Array
12.6 years ago Groot, Philip de ▴ 630
0
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0
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1.2k
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Comment: C: XPS package working with Affymetrix GeneChip 1.0 ST at gene level
12.9 years ago Groot, Philip de ▴ 630
0
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2
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1.6k
views
pdInfoBuilder fails on the new Arabidopsis Gene ST 1.0 & 1.1 arrays
Annotation oligo pdInfoBuilder oligoClasses Annotation oligo pdInfoBuilder oligoClasses
updated 13.1 years ago by ★ 4.3k • written 13.1 years ago by ▴ 630
0
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2
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1.4k
views
affy : ReadAffy() fails on HuGene-1_1-st-v1 chips
Microarray cdf affy makecdfenv PROcess oligo cycle Microarray cdf affy makecdfenv oligo
updated 13.2 years ago by 68k • written 13.2 years ago by ▴ 630
0
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1
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2.7k
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Comment: C: affy : ReadAffy() fails on HuGene-1_1-st-v1 chips
13.2 years ago Groot, Philip de ▴ 630
0
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0
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1.1k
views
bitmap() extremely slow!
Microarray affyPLM Microarray affyPLM
13.9 years ago Groot, Philip de ▴ 630
0
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0
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2.6k
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Comment: C: CDF file for Mouse Gene 1.1 ST Array
14.4 years ago Groot, Philip de ▴ 630
0
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1
reply
1.9k
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Comment: C: Illumina chip probe sequences
14.7 years ago Groot, Philip de ▴ 630
0
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1
reply
2.1k
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Comment: C: gc-rma and vsn normalization for rat microarray data
14.8 years ago Groot, Philip de ▴ 630
0
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2
replies
1.9k
views
makeAttr() missing in KEGGgraph
KEGGgraph KEGGgraph
updated 14.9 years ago by 25k • written 14.9 years ago by ▴ 630
0
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0
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749
views
FW: Mas5 works with mm set on NA?
affy affy
14.9 years ago Groot, Philip de ▴ 630
0
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0
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1.3k
views
problem in ReadAffy function (affy and affyio libraries)
affyio affyio
15.0 years ago Groot, Philip de ▴ 630
0
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1
reply
988
views
Answer: A: BioC packages for Human Gene 1.0 ST arrays
15.0 years ago Groot, Philip de ▴ 630
0
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0
replies
1.1k
views
Answer: A: how to find the probe set ID using different CDF file?
15.0 years ago Groot, Philip de ▴ 630
0
votes
0
replies
1.1k
views
question regarding qc function in simpleaffy package
cdf affy simpleaffy cdf affy simpleaffy
15.0 years ago Groot, Philip de ▴ 630
0
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0
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934
views
Fwd: regarding installaion of cdf package
cdf cdf
15.0 years ago Groot, Philip de ▴ 630
0
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0
replies
1.9k
views
Answer: A: arrayQualityMetrics Error
15.2 years ago Groot, Philip de ▴ 630
0
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3
replies
1.9k
views
RBGL fails to compile / install
RBGL GOstats RBGL GOstats
updated 15.3 years ago by ★ 7.4k • written 15.3 years ago by ▴ 630
0
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4
replies
1.4k
views
bioconductor.org removed from DNS?
updated 15.3 years ago by 21k • written 15.3 years ago by ▴ 630
0
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1
reply
2.2k
views
Answer: A: hgu133plus2cdfSYMBOL not found
15.3 years ago Groot, Philip de ▴ 630
0
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0
replies
899
views
Answer: A: custom CDF version 12.1.0 is released
15.3 years ago Groot, Philip de ▴ 630
0
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0
replies
1.9k
views
Answer: A: simpleAffy QC on HT_HG-U133_Plus_PM
15.4 years ago Groot, Philip de ▴ 630
0
votes
0
replies
897
views
[R] Is there a package similar to mogene10stprobeset.dbby for Affymetrix Exon Arrays?
Annotation cdf AnnotationDbi Annotation cdf AnnotationDbi
15.5 years ago Groot, Philip de ▴ 630
0
votes
0
replies
760
views
I share annotation libraries for the Gene Titan plates
Annotation cdf probe Annotation cdf probe
15.5 years ago Groot, Philip de ▴ 630
0
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0
replies
2.4k
views
Answer: A: microarray analysis in R without replicates
15.6 years ago Groot, Philip de ▴ 630
0
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0
replies
1.7k
views
Answer: A: Custom CDF Version 12 is released
15.7 years ago Groot, Philip de ▴ 630
0
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0
replies
1.1k
views
Answer: A: CDF file for Affy GeneChip miRNA array
15.7 years ago Groot, Philip de ▴ 630
0
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0
replies
1.1k
views
Error "Specified environment does notcontain MoGene-1_0-st-v1"
Normalization cdf affy Normalization cdf affy
15.7 years ago Groot, Philip de ▴ 630
0
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0
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2.3k
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Answer: A: ragene10st
16.1 years ago Groot, Philip de ▴ 630
0
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1
reply
2.3k
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Answer: A: ragene10st
16.1 years ago Groot, Philip de ▴ 630
0
votes
1
reply
1.1k
views
problem with createBeadSummaryData
Normalization vsn Normalization vsn
updated 16.1 years ago by ★ 1.1k • written 16.1 years ago by ▴ 630
0
votes
2
replies
1.5k
views
Can't load the arabidopsis.db annotation package created in AnnotationDbi
Annotation AnnotationDbi Annotation AnnotationDbi
16.4 years ago Groot, Philip de ▴ 630
0
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0
replies
1.5k
views
Answer: A: Can't load the arabidopsis.db annotation package created in AnnotationDbi
16.4 years ago Groot, Philip de ▴ 630
0
votes
1
reply
787
views
Can't load the arabidopsis.db annotation package created in AnnotationDbi
cdf cdf
updated 16.4 years ago by 21k • written 16.4 years ago by ▴ 630
0
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1
reply
2.5k
views
Answer: A: Building BioC 2.2 with R 2.7.0
16.9 years ago Groot, Philip de ▴ 630
0
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0
replies
816
views
Answer: A: Mailing list is not functioning properly
17.2 years ago Groot, Philip de ▴ 630
0
votes
2
replies
816
views
Mailing list is not functioning properly
17.3 years ago • updated 17.2 years ago Groot, Philip de ▴ 630
0
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0
replies
651
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Answer: A: AnnBuilder to build annotation package for hs133phsentrezg
17.3 years ago Groot, Philip de ▴ 630
0
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1
reply
1.8k
views
Answer: A: Limma: doing multiple paired t-tests in one go...
17.4 years ago Groot, Philip de ▴ 630
0
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3
replies
1.8k
views
Limma: doing multiple paired t-tests in one go...
limma limma
17.4 years ago Groot, Philip de ▴ 630
0
votes
1
reply
928
views
biocLite() and getBioC scripts install development packages!
updated 17.5 years ago by 68k • written 17.5 years ago by ▴ 630
0
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1
reply
780
views
biocLite() and getBioC scripts install development packages!
Microarray Cancer Microarray Cancer
updated 17.5 years ago by 16k • written 17.5 years ago by ▴ 630
0
votes
2
replies
791
views
Bug in probeNames()
Annotation cdf Annotation cdf
updated 17.7 years ago by ▴ 950 • written 17.7 years ago by ▴ 630
0
votes
1
reply
712
views
Bug in featureNames() in R-2.5.0 / BioC 2.0?
updated 17.9 years ago by 25k • written 17.9 years ago by ▴ 630
0
votes
3
replies
1.5k
views
Building the tomato annotation library(Affy)
Annotation Organism AnnBuilder Annotation Organism AnnBuilder
17.9 years ago Groot, Philip de ▴ 630
0
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1
reply
1.5k
views
Answer: A: Building the tomato annotation library(Affy)
17.9 years ago Groot, Philip de ▴ 630
0
votes
1
reply
1.3k
views
Problems with BioConductor 1.9 in R-2.4.1
annaffy annaffy
updated 18.3 years ago by ★ 7.4k • written 18.3 years ago by ▴ 630
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