Showing : wgcna package • reset
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WGCNA trait order in heat map
wgcna WGCNA wgcna package
4.9 years ago coyoung ▴ 10
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2
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3.3k
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Module preservation WGCNA
wgcna wgcna package modulepreservation
updated 6.0 years ago by ★ 3.0k • written 6.0 years ago by ▴ 40
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WGCNA: Matching eigengenes to samples
wgcna wgcna package
6.0 years ago Jack • 0
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2
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1.4k
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Using Kendall's Tau rank correlation coefficient for creating WGCNA network
wgcna package wgcna
6.1 years ago anni.djurhuus • 0
2
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3
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1.7k
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Problem for finding "Locus Link ID" from Annotation file
wgcna package TCGA LocusLinkID genecode ensembl
updated 6.2 years ago by 67k • written 6.2 years ago by ▴ 10
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2
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3.6k
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TOMplot error: "color" is not a graphical parameter (WGCNA)
wgcna package software error
updated 6.2 years ago by ★ 3.0k • written 6.2 years ago by • 0
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0
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1.3k
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consensus module relationship
wgcna wgcna package consensus
6.2 years ago 2323982403 ▴ 60
2
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4
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1.8k
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Segfault error when loading WGCNA
wgcna wgcna package
6.3 years ago antoinefelden ▴ 10
2
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2
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5.6k
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WGCNA extract genes from a module
WGCNA wgcna package
updated 6.3 years ago by ★ 3.0k • written 6.3 years ago by ▴ 10
1
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3
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1.5k
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SampleNetwork in WGCNA
wgcna wgcna package
6.4 years ago • updated 6.3 years ago 2323982403 ▴ 60
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2.7k
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Use of bicor in WGCNA
WGCNA wgcna package wgcna bicor
6.4 years ago bekah ▴ 40
12
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15
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19k
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WGCNA: Understanding module-trait correlations
wgcna package
updated 6.4 years ago by ★ 3.0k • written 6.4 years ago by ▴ 40
0
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0
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1.0k
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problem for finding soft power for constructing network in WGCNA algorithm
RNA-seq WGCNA package soft power
6.4 years ago modarzi ▴ 10
13 results • Page 1 of 1
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Answer: Normalizing batch effects using technical replicates for DGE analysis between tw by Gordon Smyth 52k
Just fit a model `~condition + experiment` where `condition` has three levels A, B and C. Ideally, use limma and include duplicate correlat…
Comment: Error in get_anno_data(ontology) : ontology not supported yet... by GODseeker • 0
thank u so much ,god bless u,my dear friend.
Comment: Feature Counts - potential bug with outfile.jcounts by chris2.a.white • 0
Hi @gordonsmyth and @weishi, Firstly, thank you for offering your time to develop the junction quantification module further. This is gre…
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0
Hi Tim, Thanks for your reply! Yes, my data is 450K, and it is TCGA methylation data downloaded by TCGAbiolinks. The problem is that I can …
Answer: Error in get_anno_data(ontology) : ontology not supported yet... by Guido Hooiveld ★ 4.1k
Did you check the help page for the function `enrichDO`? Type `?enrichDO`. I am asking, because there it is stated that the argument `ont`…
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Comment: Feature Counts - potential bug with outfile.jcounts
Answer: Feature Counts - potential bug with outfile.jcounts
Comment: Can we get beta values with DMRcate package
Answer: Can we get beta values with DMRcate package
DiffBind giving different results from dba.report() and dba.analyze(..., bRetrieveAnalysis=TRUE)
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Scholar to James W. MacDonald 67k
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