Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
vranges
•
reset
0
votes
0
replies
762
views
Formal class VRanges versus Large VRanges
somaticsignatures
vranges
readvcfasvranges
5.9 years ago
guillaume.dachy
• 0
3
votes
4
replies
1.8k
views
Problem when transforming Platypus vcf to VRanges
variantannotation
vcf
readvcf
vranges
updated 6.0 years ago by
Michael Lawrence
★ 11k • written 6.0 years ago by
david.mas
• 0
0
votes
2
replies
1.2k
views
Error: invalid class "VRanges" object
variantannotation
VRanges
R
Rle
updated 6.0 years ago by
Valerie Obenchain
★ 6.8k • written 6.0 years ago by
Jayendra Shinde
• 0
1
vote
2
replies
1.7k
views
Trouble while concatenating VRanges object ()
somaticsignatures
somaticsignatures package
readvcfasvranges
vranges
6.9 years ago • updated 6.8 years ago
guillaume.dachy
• 0
0
votes
3
replies
1.3k
views
about VRanges and filtering somatic variants
vranges
vcf to vranges
7.5 years ago
Bogdan
▴ 670
1
vote
4
replies
1.8k
views
Converting VCF to VRanges
somaticsignatures
vranges
updated 8.0 years ago by
Julian Gehring
★ 1.3k • written 8.0 years ago by
arsala521
▴ 10
1
vote
2
replies
1.5k
views
Combining GRange/VRange objects
granges
vranges
readvcfasvranges
somaticsignatures
updated 8.3 years ago by
Michael Lawrence
★ 11k • written 8.3 years ago by
jpluta26
• 0
3
votes
9
replies
2.1k
views
SomaticSignatures mutationContext (char ',') not in lookup table
SomaticSignatures mutationContext
VRanges
updated 8.8 years ago by
Julian Gehring
★ 1.3k • written 8.8 years ago by
tesa.severson
▴ 10
2
votes
3
replies
2.3k
views
Metadata Missing from vcf when reading in with readVcfAsVRanges
variantannotation
vranges
readvcf
readvcfasvranges
metadata
9.4 years ago
summerela
• 0
3
votes
5
replies
3.1k
views
Add Custom Annotations to Multi-Sample VCF with VariantAnnotation() package
variantannotation
granges
DNAStringSetList
findoverlaps
Vranges
9.4 years ago
summerela
• 0
10 results • Page
1 of 1
Recent ...
Replies
Comment: Ranking the GSEA Results
by
Lluís Revilla Sancho
▴ 730
You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…
Answer: Create a Graph w/ Only the Genes Interaction
by
Antonio
• 0
Thank you all, I solved my issue by creating a for loop. Cheers!
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…
Comment: Trouble Installing DADA2 (warning: R new user)
by
shepherl
3.9k
As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…
Votes
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Comment: How to get the DMR?
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
Awards
• All
Popular Question
to
mohammedtoufiq91
▴ 10
Popular Question
to
ATpoint
★ 4.2k
Popular Question
to
WouterDeCoster
▴ 130
Scholar
to
Gordon Smyth
51k
Voter
to
Chris
▴ 20
Locations
• All
Wageningen University, Wageningen, the Netherlands,
just now
United States,
9 minutes ago
Netherlands,
9 minutes ago
United States,
18 minutes ago
Pakistan,
22 minutes ago
Traffic: 1064 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6