Bioconductor Vranges

Showing : vranges • reset

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971

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somaticsignatures vranges readvcfasvranges

6.7 years ago guillaume.dachy • 0

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2.1k

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variantannotation vcf readvcf vranges

updated 6.8 years ago by Michael Lawrence ★ 11k • written 6.8 years ago by david.mas • 0

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1.5k

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variantannotation VRanges R Rle

updated 6.8 years ago by Valerie Obenchain ★ 6.8k • written 6.8 years ago by Jayendra Shinde • 0

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2.1k

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somaticsignatures somaticsignatures package readvcfasvranges vranges

7.7 years ago • updated 7.6 years ago guillaume.dachy • 0

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1.6k

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vranges vcf to vranges

8.3 years ago Bogdan ▴ 670

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2.2k

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somaticsignatures vranges

updated 8.8 years ago by Julian Gehring ★ 1.3k • written 8.8 years ago by arsala521 ▴ 10

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1.8k

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granges vranges readvcfasvranges somaticsignatures

updated 9.1 years ago by Michael Lawrence ★ 11k • written 9.1 years ago by jpluta26 • 0

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2.5k

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SomaticSignatures mutationContext VRanges

updated 9.7 years ago by Julian Gehring ★ 1.3k • written 9.7 years ago by tesa.severson ▴ 10

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2.7k

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variantannotation vranges readvcf readvcfasvranges metadata

10.2 years ago summerela • 0

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3.6k

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variantannotation granges DNAStringSetList findoverlaps Vranges

10.2 years ago summerela • 0

10 results • Page 1 of 1

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Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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