Bioconductor Txdb.mmusculus.ucsc.mm10.knowngene

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TxDb.Mmusculus.UCSC.mm10.knownGene

6 weeks ago Wolfgang RAFFELSBERGER ▴ 140

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TxDb.Mmusculus.UCSC.mm10.knownGene

updated 3.7 years ago by James W. MacDonald 68k • written 3.7 years ago by msr3nf ▴ 10

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ChIPseeker TxDb.Mmusculus.UCSC.mm10.knownGene

4.2 years ago Kasit • 0

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2.1k

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TxDb.Mmusculus.UCSC.mm10.knownGene

updated 4.3 years ago by James W. MacDonald 68k • written 4.3 years ago by smgb • 0

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AnnotationDbi annotation TxDb.Mmusculus.UCSC.mm10.knownGene

updated 4.9 years ago by James W. MacDonald 68k • written 4.9 years ago by 94133 • 0

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chipseeker txdb.mmusculus.ucsc.mm10.knowngene

7.4 years ago doan.dinh • 0

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tximport kallisto txdb.mmusculus.ucsc.mm10.knowngene

updated 7.9 years ago by James W. MacDonald 68k • written 7.9 years ago by Kaustav • 0

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txdb txdb.mmusculus.ucsc.mm10.knowngene

updated 8.4 years ago by James W. MacDonald 68k • written 8.4 years ago by Mark ▴ 10

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Comment: Design formula for circadian time-course data for vst() function by Vishnu • 0

Thank you so much for your reply.

Comment: Analyzing TnSeq data with DESeq2 by Tom • 0

[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…

Answer: Design formula for circadian time-course data for vst() function by ATpoint ★ 4.8k

This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…

Comment: Filtering after DESeq by caroline.zanchi • 0

... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…

Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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