Bioconductor Trigger

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trigger parallel processing multicore

updated 10.1 years ago by Valerie Obenchain ★ 6.8k • written 10.1 years ago by affennacken • 0

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2.6k

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RNASeq Cancer trigger RNASeq Cancer trigger

10.7 years ago Anna Esteve Codina ▴ 20

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1.5k

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Microarray impute PROcess convert mmgmos puma tigre trigger Microarray impute PROcess

updated 10.8 years ago by Solanki, Anisha ▴ 60 • written 10.8 years ago by Antti Honkela ▴ 50

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2.3k

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Cancer GenomicRanges trigger Cancer GenomicRanges trigger

updated 11.3 years ago by Valerie Obenchain ★ 6.8k • written 11.3 years ago by Dan Du ▴ 210

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1.1k

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Proteomics trigger rTANDEM Proteomics trigger rTANDEM

11.9 years ago Frederic Fournier ▴ 40

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1.4k

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trigger trigger

updated 14.1 years ago by Michael Lawrence ★ 11k • written 14.1 years ago by Paul Shannon ★ 1.1k

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1.4k

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CGH trigger CGH trigger

updated 14.1 years ago by Steve Lianoglou ★ 13k • written 14.1 years ago by Noemi Andor ▴ 100

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1.9k

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affy affyio trigger affy affyio trigger

updated 16.5 years ago by cstrato ★ 3.9k • written 16.5 years ago by Germain Paimparay ▴ 10

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1.0k

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Annotation Cancer lumiMouseV1 lumi trigger Annotation Cancer lumiMouseV1 lumi trigger

17.5 years ago Simon Lin ▴ 270

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1.2k

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GUI trigger GUI trigger

updated 19.6 years ago by stefano iacus ▴ 430 • written 19.6 years ago by David Williamson ▴ 10

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1.1k

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limma trigger limma trigger

19.8 years ago Pita ▴ 120

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1.2k

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GUI trigger GUI trigger

updated 19.8 years ago by stefano iacus ▴ 430 • written 19.8 years ago by Betty Gilbert ▴ 50

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1.4k

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GUI trigger GUI trigger

updated 19.8 years ago by James W. MacDonald 67k • written 19.8 years ago by Betty Gilbert ▴ 50

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1.3k

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PROcess trigger PROcess trigger

updated 19.9 years ago by Peter Dalgaard ▴ 20 • written 19.9 years ago by Tae-Hoon Chung ▴ 180

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1.3k

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cdf probe trigger cdf probe trigger

updated 22.0 years ago by rgentleman ★ 5.5k • written 22.0 years ago by Jens Vilstrup Johansen ▴ 20

15 results • Page 1 of 1

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Answer: DE analysis on Single cell RNA Seq time course data (using pseudotime) with 5 di by James W. MacDonald 67k

The two contrasts at the bottom are identical but for the sign of the logFC, so you should expect the same results (except for flipped sign…

Comment: Identical samples after deseq2 batch effect removal by Michael Love 42k

Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…

Comment: Identifying potentially associated gene set to drug response using GSVA by Kent • 0

Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification by James W. MacDonald 67k

You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…

Answer: HilBertVis install error by James W. MacDonald 67k

It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…

Votes

A: TopGO: How to retrieve the gene list related to a GO ID ?

A: Error in DESeqDataSet : some values in assay are not integers

A: correcting the batch effects in Limma and SVA

A: Using of limma moderated t-test with "corrected" expression matrix resulting fr

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