Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
tophat
•
reset
0
votes
1
reply
1.1k
views
python and R
snpeff
python
tophat
r
RNAseq123
updated 3.7 years ago by
Kevin Blighe
★ 4.0k • written 3.7 years ago by
kusum
• 0
0
votes
1
reply
1.1k
views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
5.8 years ago
Marcelo Laia
▴ 450
0
votes
1
reply
1.1k
views
Filtering Tophat/cufflinks data for GSEA with topGO
topGO
tophat
kolmogorov-smirnov test
updated 7.7 years ago by
James W. MacDonald
68k • written 7.7 years ago by
aaronrosenstein
• 0
2
votes
3
replies
2.5k
views
SystemPipeR: alignments with ambiguous pairing were dumped.
R
rnaseq
tophat
summarizeoverlaps
systempiper
updated 8.4 years ago by
Thomas Girke
★ 1.7k • written 8.4 years ago by
abass.conteh
• 0
2
votes
9
replies
8.3k
views
Multiple alignments (multi-mapped reads) and DESeq/edgeR pipeline
deseq
deseq2
edger
tophat
bowtie
9.8 years ago
ysdel
▴ 40
0
votes
3
replies
2.7k
views
Error when counting reads in genes with summarizeOverlaps (Genomic-Aligments package)
rnaseq
summarizeOverlaps
deseq2
tophat
genomicalignments
updated 10.4 years ago by
Dan Tenenbaum
★ 8.2k • written 10.4 years ago by
alejandro.colaneri
▴ 20
6 results • Page
1 of 1
Recent ...
Replies
Comment: compute_fasta_digest does not match Salmon index hash
by
Alex
• 0
I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…
Comment: Question on displaying color photo as Greyscale in EBImage
by
Albert
• 0
great and very nice
Comment: European Bioconductor Conference 2023 planning
by
Pandora
• 0
The [Tag Game][1] is not just a simple chase; it involves strategy and tactics as players must think quickly to avoid being tagged. Various…
Comment: Generalized edgeR functions
by
bukarimanches
• 0
I have estimated the new parameter set, it doesn't seem as useful as I thought [geometry dash lite][1] [1]: https://geometry-lite.com/
Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G
by
Morse
• 0
[Geometry Dash Lite][1] is the free version of the famous Geometry Dash series. It was made by RobTop Games and lets players enjoy the thri…
Votes
Two EPIC Methylation Array Analysis Questions
How to get DMR for Infinium methylation EPIC v2
A: GEOquery Fails to Download Series Matrix File
Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species
what the test method for enrichGO in clusterProfiler?
Awards
• All
Scholar
to
Michael Love
43k
Popular Question
to
Rob
• 0
Popular Question
to
shepherl
4.1k
Popular Question
to
Gordon Smyth
52k
Popular Question
to
Le
• 0
Locations
• All
The city by the bay,
44 minutes ago
United States,
44 minutes ago
United States,
1 hour ago
United States,
1 hour ago
United States,
3 hours ago
Traffic: 612 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6