Showing : time course • reset
3
votes
5
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975
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Is it capable to analysis the unbalanced time course experiment by DESeq2?
time course deseq2
updated 3.7 years ago by 42k • written 3.7 years ago by • 0
3
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2
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2.2k
views
DESeq2 time course model
deseq2 time series time course
updated 3.8 years ago by 42k • written 3.8 years ago by ▴ 10
0
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2
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1.1k
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Design of time-course experiment in DESeq2
deseq2 design design formula time course lrt
updated 4.5 years ago by 42k • written 4.5 years ago by • 0
0
votes
3
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859
views
Analysis strategy - possible to use naive control group as t=0 for two treatment groups?
Deseq2 design time course basal group
updated 5.0 years ago by 42k • written 5.0 years ago by • 0
0
votes
15
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2.9k
views
DESeq2 Time Series and "control" condition
deseq2 time course
5.7 years ago sum732 • 0
0
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1
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4.1k
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DESeq2 - How to study time course experiment taking subject variability into account?
deseq2 repeated measures time course
updated 6.5 years ago by 42k • written 6.5 years ago by • 0
0
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0
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998
views
Could an experienced user of Polyester help me with some questions?
rna-seq polyester simulation time course
6.5 years ago fa.gholizadeh89 • 0
7
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2
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3.3k
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Incorporating RUVSeq factors of unwanted variation in DESeq2 time course analysis
deseq2 ruvseq spike-in time course time series
updated 6.6 years ago by ▴ 950 • written 6.6 years ago by ▴ 20
0
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9
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1.8k
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limma- time course multiple treatments
limma time course
6.7 years ago • updated 6.6 years ago harelarik ▴ 60
1
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3
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1.1k
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Matrix is not full rank with Multifactorial Experiment and Time course
deseq2 multiple factor design model.matrix time course
updated 6.7 years ago by 42k • written 6.7 years ago by • 0
5
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27
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3.9k
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DESeq2 model - How to test case/control time course model when taking account within sample variability?
deseq2 multiple time points time course casecontrol model design
updated 3.5 years ago by 42k • written 7.0 years ago by ▴ 10
2
votes
5
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3.3k
views
deseq2 multifactor timeseries help
deseq2 multifactorial design time course
updated 7.2 years ago by • 0 • written 7.2 years ago by ▴ 10
0
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3
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1.3k
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About experimental design of RNA-seq
time course block batch effect WGCNA
updated 7.3 years ago by 42k • written 7.3 years ago by • 0
0
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1
reply
1.6k
views
intra-sample time series comparison using DESeq2
deseq2 time course rnaseq design contrast
updated 7.3 years ago by 42k • written 7.3 years ago by • 0
2
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1
reply
2.0k
views
edgeR: time series analysis
edger time course
updated 7.4 years ago by 51k • written 7.4 years ago by ▴ 80
2
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3
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3.3k
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Analysis of RNA-seq time series with edgeR
edger rna-seq differential expression timecourse time course
updated 7.7 years ago by ★ 28k • written 7.7 years ago by • 0
0
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3
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1.6k
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DESeq2 blocking by condition over time
deseq2 phyloseq time course
7.8 years ago akp • 0
0
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3
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2.1k
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DESeq2 time course experiments for multigroups comparison (>2 groups)
DESeq2 Time course RNA-seq
updated 8.0 years ago by 42k • written 8.0 years ago by ▴ 40
0
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5
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1.8k
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What color is assigned in heatmap for time series analysis
deseq2 time course heatmap
updated 8.0 years ago by ▴ 10 • written 8.0 years ago by ▴ 10
0
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5
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3.4k
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coefficients meaning in time course analysis with DESeq2
deseq2 timecourse time course design and contrast matrix coefficient of variation
updated 8.7 years ago by 42k • written 8.7 years ago by ★ 1.5k
3
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4
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2.8k
views
Bioconductor vignette on Time course experiments only describes how to plot the the gene with the smallest p-value. How can I plot specific genes of …
timecourse time course rna-seq deseq2 ggplot2
8.8 years ago moldach ▴ 20
0
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0
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1.3k
views
Limma table results (time course analysis)
limma time course
10.2 years ago • updated 9.6 years ago Gordon Smyth 51k
0
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1
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1.7k
views
Limma table results (time course analysis)
limma time course
updated 9.6 years ago by 51k • written 10.2 years ago by ★ 13k
23 results • Page 1 of 1
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Comment: How to get the DMR? by xuz • 0
These are from downstream association analysis result; The pipeline is only for data preprocessing and quality control. P values are associ…
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Thank you for your support. > In the double conversion, the output you supplied indicates that the number of probes is the same (453093)? …
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One can also check out a professional solution named Weeom OST to PST Converter Software. It is a reliable and secure solution to repair co…
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Apologies - you are potentially correct (assuming there is no answer within Bioconductor). I'm having trouble finding a suitable venue for …
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This is off-topic as entirely unrelated to Bioconductor. You seem to be crossposting this to > 1 community, please at least leave a link to…
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C: ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Help with error running DiffBind
Comment: Difference between enrichGO results and Enrichr website results
A: Unable to install the package "tissuesGeneExpression"
Unable to install the package "tissuesGeneExpression"
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