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tidyverse R SingleCellExperiment SingleCellData

written 16 months ago by Sitapriya • 0

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edgeR R tidyverse tidybulk

2.4 years ago Amit Indap ▴ 10

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Rscript tidyr dataframe tidyverse offtopic

updated 2.6 years ago by Marcel Ramos 700 • written 2.7 years ago by Nikhil • 0

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bioconductor R tidyverse IlluminaHumanMethylationEPICanno.ilm10b4.hg19.

updated 6.7 years ago by James W. MacDonald 68k • written 6.7 years ago by jonellevillar • 0

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variantannotation tidyverse genomicfeatures

updated 7.6 years ago by Hervé Pagès 16k • written 7.6 years ago by yduan004 ▴ 20

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Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

Comment: Question on displaying color photo as Greyscale in EBImage by Albert • 0

great and very nice

Comment: European Bioconductor Conference 2023 planning by Pandora • 0

The [Tag Game][1] is not just a simple chase; it involves strategy and tactics as players must think quickly to avoid being tagged. Various…

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Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

what the test method for enrichGO in clusterProfiler?

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