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threshold
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2.9k
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Soft-threshold in WGCNA
wgcna
network
bicor
threshold
updated 4.7 years ago by
Peter Langfelder
★ 3.0k • written 4.7 years ago by
Arindam
▴ 80
0
votes
1
reply
1.3k
views
Copy ratio threshold for calling actual CNV
PureCN
copy-ratio
threshold
updated 6.5 years ago by
markus.riester
▴ 130 • written 6.5 years ago by
twtoal
▴ 10
1
vote
1
reply
2.3k
views
WGCNA - Choosing the best threshold
wgcna
sft
picksoftthreshold
threshold
rnaseq
updated 7.2 years ago by
Peter Langfelder
★ 3.0k • written 7.2 years ago by
Fabricio Almeida-Silva
▴ 40
1
vote
1
reply
1.4k
views
SPIA plotP giving error
SPIA
plotP
threshold
8.4 years ago
docpriya21
▴ 10
4 results • Page
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Comment: DiffBind can't find a DAR
by
ATpoint
★ 4.8k
"My cake does not look as advertised in the recipe", with this sloppy sentence I hope you understand that you need to give people details, …
Comment: DESeq - help with pair wise comparisons
by
bd2000
▴ 30
Follow up question, is this the correct way to extract results? ```r results <- results(ddsObj, list(c("GroupControl.Followup", "GroupTrea…
Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin
by
ktz
• 0
Thank you for your reply! I would love to know your thoughts on the plots I've included above. > 'Are the differences between groups lar…
Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin
by
ktz
• 0
I also realised that the other gene I pointed out that was flagged as DE but had similar count differences also shows that rep1 is lower th…
Comment: DESeq - help with pair wise comparisons
by
bd2000
▴ 30
Thanks that's great!! I've followed the instructions from the link you sent, is my code correct? By correct I mean, is my code comparing fo…
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Comment: DESeq - help with pair wise comparisons
Answer: Is random access by row index possible for an indexed VCF file?
Answer: Is random access by row index possible for an indexed VCF file?
Answer: SingleR with multiple single cell references
Answer: SingleR with multiple single cell references
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