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2.7k

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samtools tabix VariantAnnotation VCFArray

updated 3.6 years ago by Vincent J. Carey, Jr. 6.7k • written 3.7 years ago by naive • 0

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3.7k

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VariantAnnotation readvcf tabix

updated 3.6 years ago by Vincent J. Carey, Jr. 6.7k • written 3.6 years ago by naive • 0

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777

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tabix

updated 6.6 years ago by Martin Morgan 25k • written 6.6 years ago by Tim Triche ★ 4.2k

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3.1k

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variantannotation tabix

updated 9.0 years ago by Michael Lawrence ★ 11k • written 9.0 years ago by TimothéeFlutre ▴ 80

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1.6k

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readvcf vcf tabix

updated 9.3 years ago by Valerie Obenchain ★ 6.8k • written 9.3 years ago by Simon Coetzee ▴ 50

5 results • Page 1 of 1

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Comment: Problem at champ.load by icecreamlover • 0

Hello! Were you able to figure this out? I am running into the same error!

Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0

Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Thank you!

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Hi Gordon, Thanks for the answer! This makes a lot of sense. Your suggested pipeline (separate processing of datasets -> gene set analyses…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

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Teacher to Gordon Smyth 51k

Popular Question to Guido Hooiveld ★ 4.1k