Bioconductor Syntenet

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syntenet

updated 13 months ago by Fabricio Almeida-Silva ▴ 40 • written 15 months ago by Sujeevan • 0

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544

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syntenet

updated 13 months ago by Fabricio Almeida-Silva ▴ 40 • written 15 months ago by Sujeevan • 0

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606

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syntenet doubletrouble

13 months ago hfyuan2016 • 0

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923

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syntenet microsynteny blocks synteny

written 21 months ago by Alexandros • 0

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902

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syntenet Bacteria synteny

updated 16 months ago by Fabricio Almeida-Silva ▴ 40 • written 18 months ago by kluongni • 0

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2.7k

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syntenet synteny Network

written 2.4 years ago by Alexandros • 0

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1.0k

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Network syntenet Clustering coefficient

22 months ago • updated 21 months ago Alexandros • 0

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2.0k

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syntenet

updated 15 months ago by Sujeevan • 0 • written 2.3 years ago by lwanderson8c • 0

8 results • Page 1 of 1

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Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Comment: GSEA preranked analysis downstream of DEseq2 by ATpoint ★ 4.8k

All due respect, this is what people do since pvalues exist, so this paper is not a reference, not is this a special score that merits a na…

Comment: Check removeBatchEffect effectiveness by ATpoint ★ 4.8k

> insert size, mean GC, etc... This is not a classical "batch" in the common sense, at least I've never seen this to be corrected for expl…

Votes

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline

How to remove X & Y chromosome genes from RNAseq data

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