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summarizeOverlaps - (GenomicAlignments) - gives warnings 'package:stats' may not be available when loading
GenomicAlignments summerizeOverlaps-Method DEXSeq
updated 4.6 years ago by 25k • written 4.6 years ago by ▴ 10
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Answer: Deseq2 res Function by Michael Love 43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
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You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
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GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix? by NB • 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
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Comment: Is it recommended to analyze different tissues together when using edgeR
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Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
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