Bioconductor Starr

Showing : starr • reset

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943

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starr chip-chip

7.8 years ago sudhirjadhao2009 • 0

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1.4k

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limma ringo starr

9.5 years ago • updated 9.4 years ago ashubiochem • 0

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1.6k

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Ringo affy tilingarray plot starr

9.6 years ago bruce.moran ▴ 30

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1.2k

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Starr Starr

updated 10.8 years ago by Julie Zhu ★ 4.3k • written 10.8 years ago by Paul ▴ 10

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1.1k

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Starr Starr

10.9 years ago Julie Zhu ★ 4.3k

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1.3k

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Starr Starr

updated 13.2 years ago by Kasper Daniel Hansen ★ 6.5k • written 13.2 years ago by Guest User ★ 13k

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949

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GO Starr GO Starr

updated 13.7 years ago by Martin Morgan 25k • written 13.7 years ago by Yongde Bao ▴ 170

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1.5k

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Starr Starr

updated 13.9 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 13.9 years ago by Feseha Abebe-Akele ▴ 30

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1.7k

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GO Yeast tilingArray Starr GO Yeast tilingArray Starr

14.4 years ago Noah Dowell ▴ 410

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1.8k

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Normalization vsn Starr Normalization vsn Starr

updated 14.5 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 14.5 years ago by Edwin Groot ▴ 230

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1.8k

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Yeast ChIPpeakAnno Starr Yeast ChIPpeakAnno Starr

updated 14.7 years ago by Julie Zhu ★ 4.3k • written 14.7 years ago by Noah Dowell ▴ 410

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1.0k

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Normalization Starr Normalization Starr

updated 14.7 years ago by Raphael Gottardo ▴ 40 • written 14.7 years ago by Hans-Ulrich Klein ▴ 330

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1.0k

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Annotation Starr Annotation Starr

updated 15.1 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 15.1 years ago by Noah Dowell ▴ 410

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1.1k

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biomaRt Ringo Starr biomaRt Ringo Starr

updated 15.1 years ago by Wolfgang Huber ★ 13k • written 15.2 years ago by Noah Dowell ▴ 410

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928

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Normalization Starr Normalization Starr

updated 15.2 years ago by Martin Morgan 25k • written 15.2 years ago by Noah Dowell ▴ 410

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1.4k

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Transcription Normalization Yeast probe affy graph tilingArray oligo pdInfoBuilder Starr

updated 15.2 years ago by Tobias Straub ▴ 430 • written 15.2 years ago by Noah Dowell ▴ 410

16 results • Page 1 of 1

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Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Comment: build samplesheet and plot profile by yf • 0

![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a

Answer: I am having issues with bowtie2_build by James W. MacDonald 67k

Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…

Answer: DEG analysis across multiple timepoints, treatments and tissues by Michael Love 43k

Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…

Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k

FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…

Votes

A: Doubt about the "zero expression" genes or genes with no reads at all in the co

Answer: Unable to install nloptr

Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?

C: How does edgeR cpm function calculate log(CPM) values?

Answer: Selection of correct coefficients or contrasts in DESeq2

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