Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
starr
•
reset
0
votes
0
replies
800
views
how to analyse chip-chip on normalized data without bpmap file or how to select bpmap file for your data(data downloaded from NCBI geo)
starr
chip-chip
7.2 years ago
sudhirjadhao2009
• 0
0
votes
4
replies
1.2k
views
Two color Nucleosomes ChIP-ChIP data analysis using Ringo package.
limma
ringo
starr
8.9 years ago
ashubiochem
• 0
0
votes
1
reply
1.5k
views
Ringo Plots Only Partially Made
Ringo
affy
tilingarray
plot
starr
9.0 years ago
bruce.moran
▴ 30
0
votes
1
reply
1.0k
views
Starr package: cmarrt.ma error
Starr
Starr
updated 10.3 years ago by
Julie Zhu
★ 4.3k • written 10.3 years ago by
Paul
▴ 10
0
votes
0
replies
973
views
Starr package: cmarrt.ma error
Starr
Starr
10.3 years ago
Julie Zhu
★ 4.3k
0
votes
2
replies
1.1k
views
readCelFile function in Starr is crashing R
Starr
Starr
updated 12.6 years ago by
Kasper Daniel Hansen
★ 6.5k • written 12.6 years ago by
Guest User
★ 13k
0
votes
1
reply
850
views
help with Starr
GO
Starr
GO
Starr
updated 13.1 years ago by
Martin Morgan
25k • written 13.1 years ago by
Yongde Bao
▴ 170
0
votes
4
replies
1.3k
views
Reading GFF using Starr
Starr
Starr
updated 13.3 years ago by
zacher@lmb.uni-muenchen.de
▴ 50 • written 13.3 years ago by
Feseha Abebe-Akele
▴ 30
0
votes
1
reply
1.6k
views
tilingArray getting started questions
GO
Yeast
tilingArray
Starr
GO
Yeast
tilingArray
Starr
13.8 years ago
Noah Dowell
▴ 410
0
votes
3
replies
1.6k
views
ChIP-chip sequence bias not removed
Normalization
vsn
Starr
Normalization
vsn
Starr
updated 13.9 years ago by
zacher@lmb.uni-muenchen.de
▴ 50 • written 13.9 years ago by
Edwin Groot
▴ 230
0
votes
6
replies
1.6k
views
Question RE: getEnrichedGo in ChIPpeakAnno package
Yeast
ChIPpeakAnno
Starr
Yeast
ChIPpeakAnno
Starr
updated 14.1 years ago by
Julie Zhu
★ 4.3k • written 14.1 years ago by
Noah Dowell
▴ 410
0
votes
1
reply
923
views
Starr - MAT normalization
Normalization
Starr
Normalization
Starr
updated 14.2 years ago by
Raphael Gottardo
▴ 40 • written 14.2 years ago by
Hans-Ulrich Klein
▴ 330
0
votes
1
reply
916
views
Ringo/Starr getProfiles function
Annotation
Starr
Annotation
Starr
updated 14.6 years ago by
zacher@lmb.uni-muenchen.de
▴ 50 • written 14.6 years ago by
Noah Dowell
▴ 410
0
votes
1
reply
956
views
Ringo/Starr getProfiles function
biomaRt
Ringo
Starr
biomaRt
Ringo
Starr
updated 14.6 years ago by
Wolfgang Huber
★ 13k • written 14.6 years ago by
Noah Dowell
▴ 410
0
votes
1
reply
833
views
Please Help with Starr Package
Normalization
Starr
Normalization
Starr
updated 14.6 years ago by
Martin Morgan
25k • written 14.6 years ago by
Noah Dowell
▴ 410
0
votes
1
reply
1.3k
views
Help with Oligo Package: Extracting and Graphing
Transcription
Normalization
Yeast
probe
affy
graph
tilingArray
oligo
pdInfoBuilder
Starr
updated 14.6 years ago by
Tobias Straub
▴ 430 • written 14.7 years ago by
Noah Dowell
▴ 410
16 results • Page
1 of 1
Recent ...
Replies
Comment: Ranking the GSEA Results
by
Lluís Revilla Sancho
▴ 730
You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…
Answer: Create a Graph w/ Only the Genes Interaction
by
Antonio
• 0
Thank you all, I solved my issue by creating a for loop. Cheers!
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…
Comment: Trouble Installing DADA2 (warning: R new user)
by
shepherl
3.9k
As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…
Votes
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Comment: How to get the DMR?
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
Awards
• All
Popular Question
to
mohammedtoufiq91
▴ 10
Popular Question
to
ATpoint
★ 4.2k
Popular Question
to
WouterDeCoster
▴ 130
Scholar
to
Gordon Smyth
51k
Voter
to
Chris
▴ 20
Locations
• All
Philippines,
2 minutes ago
St Louis, MO,
7 minutes ago
United States,
11 minutes ago
European Union,
20 minutes ago
Switzerland,
23 minutes ago
Traffic: 1253 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6