Bioconductor StageR

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DESeq2 stageR

7 months ago alephreish • 0

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652

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DEXSeq stageR

15 months ago jbono ▴ 10

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769

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stageR

updated 3.4 years ago by Koen Van den Berge ▴ 180 • written 3.4 years ago by giwa.ao • 0

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1.1k

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DRIMSeq stageR

updated 6.0 years ago by Koen Van den Berge ▴ 180 • written 6.0 years ago by sdvie • 0

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1.9k

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stageR rnaseqDTU DRIMSeq DEXSeq

6.1 years ago d-joester ▴ 20

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1.6k

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limma stageR decideTests

updated 6.1 years ago by Koen Van den Berge ▴ 180 • written 6.1 years ago by maltethodberg ▴ 180

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1.3k

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drimseq rnaseqdtu stager

updated 6.2 years ago by Michael Love 43k • written 6.2 years ago by Jack.Hearn • 0

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1.9k

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DEXSeq StageR rnaseqDTU

updated 6.3 years ago by Michael Love 43k • written 6.4 years ago by rbenel ▴ 40

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2.2k

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drimseq stageR dtu salmon rna seq

updated 6.6 years ago by Koen Van den Berge ▴ 180 • written 6.6 years ago by fiona.dick91 ▴ 60

9 results • Page 1 of 1

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Answer: EuroBioC2023 abstract submission is open! by cirwin009 • 0

Submit here https://openreview.net/group?id=bioconductor.org/EuroBioC/2023/ [Block Blast][1] This article offers a thorough and in-depth…

Comment: How to formulate 2 factor nested design in DESeq2 by Mariane • 0

Hi JK Kim, I'm having a problem similar to the one you reported. Could you please tell me how you solved this problem? Thanks

Comment: batch effect removal for agilent microarray data by gaye.yilmaz • 0

Thank you

Answer: Pathview visualisation not including positive log2 fold changes by James W. MacDonald 68k

Without providing a self-contained example, nobody can tell you if/where you went wrong. Since you get a KEGG pathway with some of the gene…

Comment: Differential variance analysis - can i use deseq2 by Marwan • 0

Thanks Michael for your answer, i didnt mean to use Deseq2 directly for the variance testing, but more like asking if using the (VST) data…

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Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Suggesting changing the "reply-to" field to the mailing list address.

Answer: UniProt.ws query for single UniRef90 ID takes several minutes

A: How to extract DESeq2 results for an interaction design

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?

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Popular Question to mahes.muniandy • 0