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Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma
roast
statistics
source code
gene set testing
6.7 years ago
Andrea Carenzo
• 0
0
votes
0
replies
1.2k
views
Error while extracting pseudo amino acid composition using protr
r
source code
error
6.9 years ago
shreyasarkar0
• 0
2
votes
4
replies
1.3k
views
package "isa2", function isa.iterate()
source code
isa.iterate()
updated 7.9 years ago by
Haiying.Kong
▴ 110 • written 7.9 years ago by
zhang.jianhai
▴ 10
4
votes
4
replies
1.9k
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Where can I use the VSN source code in C++?
vsn
r language
C++
source code
updated 8.2 years ago by
Lluís Revilla Sancho
▴ 760 • written 8.2 years ago by
core_wzw
• 0
0
votes
1
reply
1.4k
views
get LCMS masses with more significant figures
source code
xcms
m/z
groupval
xcmsSet
updated 8.5 years ago by
Johannes Rainer
★ 2.1k • written 8.5 years ago by
juniormbarga
• 0
0
votes
3
replies
3.1k
views
Locating older version of Bioconductor packages
reproducibility
archive
source code
updated 9.5 years ago by
Dan Tenenbaum
★ 8.2k • written 9.5 years ago by
brucbruc
• 0
0
votes
2
replies
1.6k
views
Bioconductor source code - Errno::ECONNREFUSED in Codes#show
medips
bioconductor
error
source code
10.4 years ago
malbert1
• 0
7 results • Page
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Comment: Unable to install a forged BSgenome package
by
James W. MacDonald
68k
R doesn't like the name of your package. I would bet that it's the minus sign, so maybe remove that from the name of the package and from t…
Comment: Unable to install a forged BSgenome package
by
JABEZ RAJU
• 0
install.packages("E:/PhD data/RNAseq/TSS/BSgenome.Hnudivirus-2.NCBI.ViralProj14215", repos = NULL, type = "source") Installing package into…
Comment: DESeq2 with proteomics data
by
wook2014
• 0
You may need to do NA imputation before give the data to DEseq2 and there are study on DEseq2 performance on proteomics data, like :https:/…
Answer: Unable to install a forged BSgenome package
by
James W. MacDonald
68k
Add a repos = NULL to `install.packages`. You may also need to either move the file to a dir that doesn't have a space in the name or you […
Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an
by
James W. MacDonald
68k
Have you figured out how to do this using tidy grammar? Using non-tidy grammar is quite simple, and perhaps you already know how to do that…
Votes
Answer: Unable to install a forged BSgenome package
Answer: How to combine two DESeq2 objects (dds) for analysis
How to combine two DESeq2 objects (dds) for analysis
How can I correctly use phyloseq with Docker?
A: DESeq2::sizeFactors() function does not output the sizeFactor table.
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