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Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma
roast
statistics
source code
gene set testing
6.4 years ago
Andrea Carenzo
• 0
0
votes
0
replies
1.1k
views
Error while extracting pseudo amino acid composition using protr
r
source code
error
6.6 years ago
shreyasarkar0
• 0
2
votes
4
replies
1.2k
views
package "isa2", function isa.iterate()
source code
isa.iterate()
updated 7.6 years ago by
Haiying.Kong
▴ 110 • written 7.6 years ago by
zhang.jianhai
▴ 10
4
votes
4
replies
1.8k
views
Where can I use the VSN source code in C++?
vsn
r language
C++
source code
updated 8.0 years ago by
Lluís Revilla Sancho
▴ 760 • written 8.0 years ago by
core_wzw
• 0
0
votes
1
reply
1.3k
views
get LCMS masses with more significant figures
source code
xcms
m/z
groupval
xcmsSet
updated 8.2 years ago by
Johannes Rainer
★ 2.1k • written 8.2 years ago by
juniormbarga
• 0
0
votes
3
replies
2.8k
views
Locating older version of Bioconductor packages
reproducibility
archive
source code
updated 9.3 years ago by
Dan Tenenbaum
★ 8.2k • written 9.3 years ago by
brucbruc
• 0
0
votes
2
replies
1.6k
views
Bioconductor source code - Errno::ECONNREFUSED in Codes#show
medips
bioconductor
error
source code
10.2 years ago
malbert1
• 0
7 results • Page
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Comment: Unused arguments error without used arguments in GSVA?
by
1sunmic2
• 0
It was due to the comma. Thank you!
Answer: Unused arguments error without used arguments in GSVA?
by
Axel Klenk
★ 1.1k
Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…
Answer: Restricting differential binding analysis to only TSS-proximal regions
by
Aaron Lun
★ 28k
Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…
Comment: Sample-specific methylation values using QSEA
by
User3088
• 0
Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…
Comment: input for singR function
by
iamin053
• 0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Votes
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Unused arguments error without used arguments in GSVA?
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
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