Bioconductor Snps

Showing : snps • reset

vote

replies

2.9k

views

snps VCF

updated 2.5 years ago by Arafat • 0 • written 7.7 years ago by rkdonthu ▴ 10

votes

735

views

hierClust R SNPs clustering

updated 2.6 years ago by James W. MacDonald 67k • written 2.6 years ago by sekhwal • 0

votes

replies

1.1k

views

SNPs

5.6 years ago pltbiotech_tkarthi • 0

votes

replies

1.4k

views

snps vcf venn diagram ggplot2

5.9 years ago mictadlo ▴ 10

votes

replies

1.4k

views

bioconductor molecular biology snps

updated 6.0 years ago by James W. MacDonald 67k • written 6.0 years ago by jebreen20 • 0

votes

replies

2.8k

views

motifbreakR vcf snps motif analysis

updated 6.4 years ago by Valerie Obenchain ★ 6.8k • written 6.4 years ago by svlachavas ▴ 830

votes

replies

1.6k

views

variantannotation SNPs txdb.hsapiens.ucsc.hg19.knowngene ucsc

updated 7.4 years ago by Valerie Obenchain ★ 6.8k • written 7.4 years ago by Lna • 0

votes

1.5k

views

hsapiens snps indels

updated 9.0 years ago by Hervé Pagès 16k • written 9.0 years ago by kredens • 0

votes

1.7k

views

Biostrings SNPs alignment

updated 9.3 years ago by Hervé Pagès 16k • written 9.3 years ago by ben.ward ▴ 30

votes

replies

2.0k

views

gviz ideogram snps

updated 9.8 years ago by florian.hahne@novartis.com ★ 1.6k • written 9.8 years ago by vnyirongo • 0

votes

replies

2.4k

views

overlap snps granges iranges

updated 10.1 years ago by Michael Lawrence ★ 11k • written 10.1 years ago by anastasiya-terskih ▴ 10

11 results • Page 1 of 1

Recent ...

Replies

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M by dseauer • 0

Thank you so much for all of your help! I really appreciate it!

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M by Gordon Smyth 51k

Thanks for extra info, but be careful that the Bioconductor support site requires code to be an markdown format. Copying code with prompts …

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M by dseauer • 0

Thank you so much for your reply! I am sincerely sorry- of course I do not have multiple GAL files- just one- I meant gpr files! I am so so…

Comment: Is it possible to parallelise saveHDF5SummarizedExperiment by Stefano Mangiola ▴ 20

Thansk Herve', I will try. For reference this is the parallelization implementation of zellkonverter, to save anndata from SCE https://gi…

Comment: biomaRt rnorvegicus_gene_ensembl not available anymore by Jason • 0

Any update on the resolution to this? I'm having the same issue with another species.

Votes

A: Recommendations for combining multiple 10x runs into one SingleCellExperiment

Answer: Handling biological replicates in DESeq2

Comment: biomaRt rnorvegicus_gene_ensembl not available anymore

biomaRt rnorvegicus_gene_ensembl not available anymore

A: Does edgeR need to specify reference group?

Awards • All

Commentator to James W. MacDonald 67k

Popular Question to Stefano Mangiola ▴ 20