Bioconductor Slingshot

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monocle slingshot

14 months ago EspressoKris ▴ 10

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tradeSeq slingshot

2.3 years ago manduchi ▴ 10

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slingshot plot3d.SlingshotDataSet

updated 6 months ago by Kelly Street • 0 • written 2.5 years ago by manduchi ▴ 10

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Slingshot

updated 4.6 years ago by Martin Morgan 25k • written 4.6 years ago by Adrian Johnson ▴ 330

4 results • Page 1 of 1

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Comment: Merge Replicates vs Mixed Model by gabriel.hoffman ▴ 160

It is almost always better to retain the full observed data, if the statistical software is able to model the repeated measures. This is a…

Comment: makeContrastsDream for Interaction by gabriel.hoffman ▴ 160

The simplest way to handle contrasts with an interaction term is to create a new variable. Lets consider a simpler case with variables `Se…

Answer: DESeq2 sizefactors counfounded with biological treatment by James W. MacDonald 67k

Your question is off-topic for this site, which is primarily intended to help people with technical issues with Bioconductor packages rathe…

Comment: Epic v2 Annotation CpG_maf source? by Meghan • 0

Thank you, so much, for this reply!

Comment: txdb.mmusculus.ucsc.mm10.knowngene issue on X chromosome by remi-xavier.coux ▴ 10

That indeed worked, thanks a lot for the help (and for karyoploteR)

Votes

Answer: biomaRt has encountered an unknown server error while using getLDS

Comment: txdb.mmusculus.ucsc.mm10.knowngene issue on X chromosome

Answer: Epic v2 Annotation CpG_maf source?

Answer: bioconductor packages on bioconda

Filtering low variance genes for WGCNA

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Popular Question to Hans-Ulrich Klein ▴ 330