Bioconductor Simplesinglecell

Showing : simplesinglecell • reset

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2.4k

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DropletUtils scRNA-seq emptyDrops simplesinglecell cell calling

updated 4.3 years ago by Aaron Lun ★ 28k • written 5.4 years ago by C T ▴ 140

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1.5k

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simpleSingleCell

updated 5.5 years ago by Aaron Lun ★ 28k • written 5.5 years ago by Angelos Armen • 0

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858

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simpleSingleCell

updated 5.5 years ago by Aaron Lun ★ 28k • written 5.5 years ago by Angelos Armen • 0

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5.1k

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DropletUtils EmptyDrops simpleSingleCell

updated 2.5 years ago by Stefano Mangiola ▴ 20 • written 5.5 years ago by shbrief ▴ 20

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2.0k

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scran simpleSingleCell

updated 5.5 years ago by Aaron Lun ★ 28k • written 5.5 years ago by Angelos Armen • 0

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3.2k

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limma edgeR simplesingleCell scran scater

updated 5.5 years ago by Aaron Lun ★ 28k • written 5.6 years ago by Bogdan ▴ 670

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2.0k

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SingleCellExperiment scran limma simpleSingleCell

updated 5.7 years ago by Aaron Lun ★ 28k • written 5.7 years ago by Matt Mulé • 0

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1.9k

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DropletUtils SingleCellExperiement DelayedArray simpleSingleCell

updated 5.7 years ago by Aaron Lun ★ 28k • written 5.7 years ago by Steve Pederson ▴ 170

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3.0k

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singlecellexperiment dropletutils simplesinglecell

updated 6.3 years ago by Aaron Lun ★ 28k • written 6.3 years ago by Peter Hickey ▴ 750

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1.1k

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workflows simplesinglecell

updated 6.4 years ago by Aaron Lun ★ 28k • written 6.4 years ago by es.azadian • 0

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1.1k

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simplesinglecell

updated 6.9 years ago by Aaron Lun ★ 28k • written 6.9 years ago by Xingyu • 0

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2.1k

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scater singlecellexperiment simplesinglecell

updated 7.0 years ago by Aaron Lun ★ 28k • written 7.0 years ago by Xingyu • 0

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3.7k

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scater simpleSingleCell workflows

updated 7.6 years ago by Aaron Lun ★ 28k • written 7.6 years ago by sandmann.t ▴ 70

13 results • Page 1 of 1

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Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0

Thank you, I will try this and see.

Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0

Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…

Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0

how you did it pls explain

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 68k

If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…

Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes by a.alkema • 0

Oh, that's silly - thanks, will do!

Votes

Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet

What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =

Comment: Unused arguments error without used arguments in GSVA?

Answer: Reducing and aggregating GRanges with gaps using plyranges

Awards • All

Scholar to Michael Love 43k

Popular Question to Malcolm Cook ★ 1.6k