Bioconductor Shrna

Showing : shrna • reset

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1.7k

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edger shrna

8.0 years ago sirintra ▴ 10

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shrna edger deseq2 differential expression normalized counts

8.6 years ago Jane Merlevede ▴ 90

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1.1k

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limma gmap shRNA dropout screen

updated 8.8 years ago by Aaron Lun ★ 28k • written 8.8 years ago by Anna Dvorkin ▴ 40

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1.9k

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edgeR processamplicons shrna

updated 9.3 years ago by thomas.leete • 0 • written 9.4 years ago by Anne Deslattes Mays ▴ 10

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3.0k

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shRNAseq edgeR shRNA

updated 9.5 years ago by Gordon Smyth 52k • written 9.5 years ago by KB ▴ 50

5 results • Page 1 of 1

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Comment: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by AB ▴ 110

Force=TRUE did the trick. Thank you.

Comment: www.stats.ox.ac.uk seems to be off, leading to errors/delays when installing pac by DENG • 0

[https://github.com/djunsheep/CRANextra/blob/main/README.md][1] add the following to the `.Rprofile` and `Rprofile.site` # fixing the…

Comment: Transcript ID Mismatch in riboWaltz Annotation Table by shepherl 4.1k

riboWalze is not a Bioconductor package and does not appear to be a Bioconductor function; the maintainer is not guaranteed to be on this …

Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by shepherl 4.1k

What is your `sessionInfo()`? I just tried locally and it works fine so there might have been a bad or interrupted download when initially…

Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Votes

Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

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Scholar to shepherl 4.1k

Popular Question to James W. MacDonald 68k