Bioconductor Samples

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samples sampleNumbers DESeq2

written 2.2 years ago by Lidia • 0

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samples rlog DESeq2

updated 2.6 years ago by Michael Love 42k • written 2.6 years ago by rafaelsolersanblas ▴ 50

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R deseq2 Paired Samples

updated 5.4 years ago by Michael Love 42k • written 5.4 years ago by m.wekking • 0

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edger normalization samples comparisons

updated 6.8 years ago by Gordon Smyth 51k • written 6.8 years ago by roser.navarro • 0

4 results • Page 1 of 1

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Answer: Create a Graph w/ Only the Genes Interaction by Antonio • 0

Thank you all, I solved my issue by creating a for loop. Cheers!

Comment: Ranking the GSEA Results by alserg ▴ 260

Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself

Comment: Ranking the GSEA Results by alserg ▴ 260

Where did you see ranking of genes by log2FC * (-log10 p-value)? I don't think I ever saw one and not sure what it should achieve. Aren't y…

Comment: Trouble Installing DADA2 (warning: R new user) by shepherl 3.9k

As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…

Answer: LRT test for different timepoints (one tissue types vs. many tissue types) by Michael Love 42k

No, this is a contrast of estimated coefficient (e.g. the Wald test).

Votes

Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)

ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features

Comment: How to get the DMR?

Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it

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