Bioconductor Rsqlite

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RSQLite org.Hs.eg.db

3.6 years ago chenghaomai • 0

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3.1k

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RSQLite lumi

4.4 years ago Rohmatul • 0

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1.1k

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jaspar rsqlite

updated 7.1 years ago by James W. MacDonald 68k • written 7.1 years ago by m.d.shapiro • 0

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3.5k

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R RSQLite

updated 7.7 years ago by James W. MacDonald 68k • written 7.7 years ago by biostR ▴ 10

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reactome.db rsqlite

updated 8.2 years ago by willem.ligtenberg ▴ 150 • written 8.2 years ago by Lluís Revilla Sancho ▴ 760

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1.3k

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rsqlite

8.2 years ago ngrundmann • 0

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rsqlite bioconductor bioclite rcpp.h

updated 8.2 years ago by Martin Morgan 25k • written 8.2 years ago by conkline • 0

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1.4k

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oligo rsqlite pd.hta.2.0

updated 8.6 years ago by James W. MacDonald 68k • written 8.6 years ago by Vincent J. Carey, Jr. 6.7k

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org.hs.eg.db DBI rsqlite

updated 9.0 years ago by Martin Morgan 25k • written 9.0 years ago by Gordon Smyth 52k

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2.3k

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annotation annotationdbi rsqlite

10.0 years ago Ceca Bojic ▴ 10

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biocinstaller genomicfeatures rsqlite

updated 10.4 years ago by Dan Tenenbaum ★ 8.2k • written 10.4 years ago by vimartin • 0

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2.6k

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VariantAnnotation RSQLite

10.4 years ago remi.tournebize ▴ 10

12 results • Page 1 of 1

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Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

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Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

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