Bioconductor Rqc

Showing : rqc • reset

0

votes

1

reply

623

views

Rqc rbams rqc mmusculus scanbams

updated 21 months ago by ATpoint ★ 4.5k • written 21 months ago by Anushka • 0

1

vote

2

replies

1.3k

views

Rqc

updated 7.9 years ago by Welliton de Souza ▴ 70 • written 7.9 years ago by paucarrio ▴ 10

3

votes

12

replies

6.7k

views

limma Rqc beadarray Lumi

updated 8.8 years ago by Welliton de Souza ▴ 70 • written 8.8 years ago by raya.girish • 0

5

votes

15

replies

3.1k

views

Rqc

8.8 years ago kritikamish99 ▴ 10

4 results • Page 1 of 1

Recent ...

Replies

Comment: makeContrastsDream for Interaction by abadgerw • 0

Thank you! I will try this out.

Comment: Merge Replicates vs Mixed Model by abadgerw • 0

Thanks, @gabrielhoffman The data is actually proteomics so it is intensity data which is why I did not use voom but rather ran ebayes wi…

Comment: ANOVA like approach of edgeR by Gordon Smyth 52k

To identify common upregulated or downregulated genes, you would need to test for media condition contrasts for each cell type separately, …

Comment: DESeq2 sizefactors counfounded with biological treatment by Anna • 0

Hi James, Apologies (re: posting in the wrong place). Thank you so much for your response, that was exactly the help I needed. Best, A…

Comment: ANOVA like approach of edgeR by Talip ▴ 10

I am comparing the expression patterns of different tissue cell lines (CellType) under five distinct media conditions (Status). Since the c…

Votes

Comment: makeContrastsDream for Interaction

Answer: Limma- Print-tip loess normalisation-printer layout information does not match M

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M

Answer: ANOVA like approach of edgeR

Awards • All

Scholar to Gordon Smyth 52k

Popular Question to mohammedtoufiq91 ▴ 10

Popular Question to Hans-Ulrich Klein ▴ 330