Bioconductor Rownames

Showing : rownames • reset

vote

replies

6.4k

views

help DESeq2 DESeqDataSetFromMatrix rownames

updated 2.8 years ago by Sanatan • 0 • written 4.0 years ago by dorina.jamniczky • 0

vote

replies

5.9k

views

deseq2 rownames

updated 3.6 years ago by Michael Love 43k • written 4.8 years ago by corellig ▴ 10

votes

replies

1.4k

views

rownames replace characters

updated 5.2 years ago by Gordon Smyth 52k • written 5.2 years ago by ph.shimaasherif • 0

votes

replies

2.3k

views

WGCNA wgcna rownames

updated 7.6 years ago by Peter Langfelder ★ 3.0k • written 7.6 years ago by je.maxfield • 0

votes

2.5k

views

phyloseq merge_samples rownames error

8.5 years ago newmanss • 0

votes

replies

1.6k

views

DEXSeq rownames pre-filtering

updated 9.2 years ago by Wolfgang Huber ★ 13k • written 9.2 years ago by arom2 • 0

votes

replies

1.3k

views

multiple sequences masks rowmask rownames biostrings

updated 9.3 years ago by Valerie Obenchain ★ 6.8k • written 9.3 years ago by ben.ward ▴ 30

votes

2.8k

views

heatmap rownames genes

9.6 years ago johnlee.johnson • 0

8 results • Page 1 of 1

Recent ...

Replies

Comment: BiocParallel_1.40.1.tar.gz not available by Johan • 0

It worked. Thanks :)

Comment: Model performance for spline modelling of RNA-seq timecourses in edgeR by skiaphrene ▴ 10

Dear Gordon, Thank you very much for your prompt reply. I agree with the limma/edgeR perspective of including all potentially explanatory…

Comment: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k

What sort of object is `expression`? Does it contain any missing values?

Answer: Deleted:No significant MVPs with a BH adjusted P-value below 0.05 by shocked.tick.zyet • 0

Dealing with those adjusted p-values in ChAMP can feel like a frustrating game of [Uno Online](https://unoonlinefree.com) , especially when…

Comment: DESeq2 lfcShrink drastic shrinkage by Nick • 0

Did you ever figure out the cause of this? I am seeing very similar results and wondering if you have advice on how you may have resolved t…

Votes

Answer: BiocParallel_1.40.1.tar.gz not available

Modelling gene program dynamics across time with {lemur}

A: DESeq2 one group vs multiple groups comparison in presence of batch effect

Comment: BiocParallel_1.40.1.tar.gz not available

Awards • All