Bioconductor Rnaseqdtu

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fishpond DESeq2 rnaseqDTU

updated 3 months ago by Michael Love 43k • written 3 months ago by muhammadsohailraza • 0

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rnaseqDTU DRIMSeq

2.8 years ago wangziwei0010 ▴ 10

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1.7k

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rnaseqDTU

3.1 years ago • updated 3.0 years ago ksong ▴ 10

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1.8k

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DEXSeq rnaseqDTU

3.7 years ago • updated 3.6 years ago rbenel ▴ 40

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1.7k

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RNA-seq DRIMSeq DEXSeq rnaseqDTU

3.7 years ago bioinformatic_trainee ▴ 10

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816

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rnaseqDTU

updated 4.5 years ago by Michael Love 43k • written 4.5 years ago by rohitsatyam102 ▴ 20

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928

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rnaseqdtu RNASeq DEXSeq DESeq2

updated 4.8 years ago by Michael Love 43k • written 4.8 years ago by debatosh das ▴ 10

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927

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rnaseqDTU

updated 4.9 years ago by Michael Love 43k • written 4.9 years ago by dixit.anirudha • 0

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1.1k

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rnaseqDTU

updated 5.7 years ago by Michael Love 43k • written 5.7 years ago by nicog • 0

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2.0k

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rnaseqdtu

5.8 years ago rbenel ▴ 40

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1.7k

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DEXSeq DTU salmon rnaseqDTU foldchange

updated 6.0 years ago by Michael Love 43k • written 6.3 years ago by fiona.dick91 ▴ 60

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2.0k

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rnaseqDTU DRIMseq DEXseq rna-seq

6.1 years ago saddamhusain77 • 0

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4.1k

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tximport dtu salmon TPM rnaseqDTU

written 6.1 years ago by fiona.dick91 ▴ 60

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2.0k

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stageR rnaseqDTU DRIMSeq DEXSeq

6.2 years ago d-joester ▴ 20

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1.6k

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rnaseqdtu

6.3 years ago rbenel ▴ 40

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2.9k

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rnaseqDTU dtu

updated 6.3 years ago by Michael Love 43k • written 6.3 years ago by rbenel ▴ 40

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1.4k

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DTU DRIMSeq rnaseqDTU

updated 6.3 years ago by Michael Love 43k • written 6.3 years ago by fiona.dick91 ▴ 60

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1.4k

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drimseq rnaseqdtu stager

updated 6.4 years ago by Michael Love 43k • written 6.4 years ago by Jack.Hearn • 0

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2.0k

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DEXSeq StageR rnaseqDTU

updated 6.5 years ago by Michael Love 43k • written 6.5 years ago by rbenel ▴ 40

19 results • Page 1 of 1

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Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Comment: GSEA preranked analysis downstream of DEseq2 by ATpoint ★ 4.8k

All due respect, this is what people do since pvalues exist, so this paper is not a reference, not is this a special score that merits a na…

Comment: Check removeBatchEffect effectiveness by ATpoint ★ 4.8k

> insert size, mean GC, etc... This is not a classical "batch" in the common sense, at least I've never seen this to be corrected for expl…

Answer: Check removeBatchEffect effectiveness by Gordon Smyth 52k

Your call to removeBatchEffect() is not correct because that function does not have an argument called `batch3`, meaning that the batch fac…

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Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline

How to remove X & Y chromosome genes from RNAseq data

Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?

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