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topGO: how do I retrieve my genes contributing to the GO term enrichment
gene
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topGO
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21 months ago
Priya
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Answer: Newbie Question - adding metadata to an analysis
by
James W. MacDonald
67k
See [Section 4][1]. But do note that you do not need for the `phenoData` slot to contain the data. You can simply have a 'targets' data.fra…
Comment: Want numbers in DESeq to be seen as numerical, not categorical
by
swbarnes2
★ 1.4k
How did you import the data? Did you accidently leave in `stringAsFactors=True`? But I'm not entirely sure that you don't want that to be…
Comment: MissMethyl failed to use gometh function for EPICv2
by
James W. MacDonald
67k
By version 1.38.0, I mean version 1.38.0 of `MissMethyl`.
Answer: MissMethyl failed to use gometh function for EPICv2
by
James W. MacDonald
67k
You need to [upgrade to the release version of Bioconductor][1]. You have version 1.38.0 installed which indicates that you are using the p…
Comment: EuroBioC2023 abstract submission closing soon!
by
Jeremy
• 0
Thanks for the reminder! If you're a Bioconductor user or developer, make sure to [tabs][1] submit your abstract by the deadline, Monday, A…
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Comment: Theoretical WGCNA Question
Answer: Is it possible to work with DESeq2 where data is not properly matched for sex a
Answer: Is it possible to work with DESeq2 where data is not properly matched for sex a
Comment: Comparing different method for DESEQ2
Answer: How do I fix an odd voom plot in a combined dataset?
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