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repitools
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3
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1.9k
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How to handle multi-TSS genes in Repitools?
repitools
promoter
tss
annotation
6.3 years ago
Ryan C. Thompson
★ 7.9k
1
vote
2
replies
1.4k
views
cpgDensityCalc function in Repitools giving contradictory tools
repitools
bioconductor
cpgDensityCalc
7.2 years ago
divyswar01
• 0
0
votes
0
replies
915
views
Analysis of MBD-seq data without ssl control using BayMeth
Baymeth
methylation
MBD-seq
Repitools
8.1 years ago
pm2015
• 0
0
votes
0
replies
909
views
SssI free analysis in BayMeth/Repitools
repitools
8.9 years ago
Matthias Lienhard
▴ 240
0
votes
0
replies
1.0k
views
Repitools - featureScores - mappability Bsgenome object
BSgenome
BSgenome
Repitools
BSgenome
BSgenome
Repitools
10.3 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.3k
views
Repitools - featureScores - mappability Bsgenome object
BSgenome
BSgenome
Repitools
BSgenome
BSgenome
Repitools
10.4 years ago
Jaritz,Markus
▴ 20
0
votes
5
replies
2.1k
views
Graph of methylation data around TSS - Repitools or other package?
GO
Repitools
GO
Repitools
updated 10.6 years ago by
Dario Strbenac
★ 1.5k • written 10.6 years ago by
Tim Smith
★ 1.1k
0
votes
0
replies
1.0k
views
Analysing grouped datasets in repitools
limma
Repitools
limma
Repitools
11.3 years ago
Guest User
★ 13k
0
votes
21
replies
6.8k
views
BAM files to Genomic Ranges object
Alignment
convert
Repitools
Alignment
convert
Repitools
updated 7 months ago by
Marge
• 0 • written 11.5 years ago by
José Luis Lavín
▴ 280
0
votes
3
replies
1.7k
views
Repitools/ClusterPlots
BSgenome
BSgenome
Repitools
BSgenome
BSgenome
Repitools
updated 12.7 years ago by
Chao-Jen Wong
▴ 580 • written 12.7 years ago by
Guest User
★ 13k
10 results • Page
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Comment: limma comparison for small sample size and how to get covariance matrix
by
Gordon Smyth
51k
Your MDS plot is better than before, but you are still not following the recommendation for making for making such plots given in the limma…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
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