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3
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How to handle multi-TSS genes in Repitools?
repitools promoter tss annotation
6.9 years ago Ryan C. Thompson ★ 7.9k
1
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2
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1.6k
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cpgDensityCalc function in Repitools giving contradictory tools
repitools bioconductor cpgDensityCalc
7.8 years ago divyswar01 • 0
0
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0
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1.0k
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Analysis of MBD-seq data without ssl control using BayMeth
Baymeth methylation MBD-seq Repitools
8.7 years ago pm2015 • 0
0
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0
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1.0k
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SssI free analysis in BayMeth/Repitools
repitools
9.5 years ago Matthias Lienhard ▴ 280
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1.1k
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Repitools - featureScores - mappability Bsgenome object
BSgenome BSgenome Repitools BSgenome BSgenome Repitools
10.9 years ago Dario Strbenac ★ 1.5k
0
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1.5k
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Repitools - featureScores - mappability Bsgenome object
BSgenome BSgenome Repitools BSgenome BSgenome Repitools
11.0 years ago Jaritz,Markus ▴ 20
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5
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2.4k
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Graph of methylation data around TSS - Repitools or other package?
GO Repitools GO Repitools
updated 11.2 years ago by ★ 1.5k • written 11.2 years ago by ★ 1.1k
0
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1.1k
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Analysing grouped datasets in repitools
limma Repitools limma Repitools
11.9 years ago Guest User ★ 13k
0
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21
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7.4k
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BAM files to Genomic Ranges object
Alignment convert Repitools Alignment convert Repitools
updated 14 months ago by • 0 • written 12.1 years ago by ▴ 280
0
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3
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1.9k
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Repitools/ClusterPlots
BSgenome BSgenome Repitools BSgenome BSgenome Repitools
updated 13.3 years ago by ▴ 580 • written 13.3 years ago by ★ 13k
10 results • Page 1 of 1
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Replies
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0
how you did it pls explain
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 68k
If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…
Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes by a.alkema • 0
Oh, that's silly - thanks, will do!
Votes
Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
Comment: Unused arguments error without used arguments in GSVA?
Answer: Reducing and aggregating GRanges with gaps using plyranges
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