Bioconductor RecountWorkflow

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recount recountWorkflow recount3

updated 19 months ago by Leonardo Collado Torres ★ 1.1k • written 2.0 years ago by Max Bone • 0

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recount recountWorkflow recount3

updated 19 months ago by Leonardo Collado Torres ★ 1.1k • written 24 months ago by dml • 0

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recountWorkflow recount3

updated 23 months ago by Leonardo Collado Torres ★ 1.1k • written 2.0 years ago by soever ▴ 20

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recount3 recountWorkflow

updated 3.1 years ago by Leonardo Collado Torres ★ 1.1k • written 3.2 years ago by António Miguel de Jesus Domingues ▴ 510

4 results • Page 1 of 1

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Comment: Normalizing batch effects using technical replicates for DGE analysis between tw by James W. MacDonald 67k

Oh, right. There's two ways to enter code. If you are in the middle of a sentence and you want to include a function name, you wrap the nam…

Comment: Normalizing batch effects using technical replicates for DGE analysis between tw by anna.cot.anna.cot ▴ 30

Thank you James, that really helped! I tried CODE `enter code here` but I must have dome it incorrectly, as it showed all in red.

Comment: Normalizing batch effects using technical replicates for DGE analysis between tw by James W. MacDonald 67k

Please come back to the support site and view your post - I've fixed it for you. If you want to show people your targets file, just paste t…

Comment: Normalizing batch effects using technical replicates for DGE analysis between tw by anna.cot.anna.cot ▴ 30

Thank you Gordon! Apologies if this is a too basic question-I'm a biologist and want to ensure I understand correctly. Here is my metadata …

Comment: nightmare to make custom txdb for genomes from ToxoDB by rohitsatyam102 ▴ 20

I offer my apologies if the title was misleading. I will change it at once. I wrote txdb because the error emnated from `seqlevelsStyle(txd…

Votes

Answer: nightmare to make custom txdb for genomes from ToxoDB

Comment: nightmare to make custom txdb for genomes from ToxoDB

Answer: Normalizing batch effects using technical replicates for DGE analysis between tw

Answer: nightmare to make custom txdb for genomes from ToxoDB

A: Advice on correcting for batch effect using DESeq2

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