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reads
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reset
2
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3
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Boxplot function not showing all reads length on x-axis
boxplot
reads
fastq
sequencing
rsubread
updated 5.1 years ago by
Wei Shi
★ 3.6k • written 5.1 years ago by
Raito92
▴ 60
2
votes
5
replies
979
views
Software package for RNA-seq reads simulation?
rna-seq
reads
updated 5.1 years ago by
Gordon Smyth
51k • written 5.1 years ago by
Ramiro Magno
▴ 100
0
votes
1
reply
1.3k
views
DEXseq reads all in ambiguous_readpair_position and empty categories
dexseq
reads
7.1 years ago
514028929
• 0
0
votes
2
replies
989
views
DiffBind absence of reads
diffbind
reads
bamfiles
updated 7.2 years ago by
Rory Stark
★ 5.2k • written 7.2 years ago by
kbrnrc
• 0
0
votes
7
replies
1.8k
views
Speeding up or replacing Loops to process Bam Reads
genomicranges
reads
genomicfeatures
Bam
9.3 years ago
gen
▴ 30
2
votes
2
replies
3.2k
views
DESeq: filter out low count reads
deseq
filter
reads
9.5 years ago
ccheung
• 0
0
votes
1
reply
2.2k
views
Rename read-chromosome-names to refseq-chromosome-names.
reads
updated 9.7 years ago by
James W. MacDonald
66k • written 9.7 years ago by
marcovth
• 0
7 results • Page
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Comment: Ranking the GSEA Results
by
Lluís Revilla Sancho
▴ 730
You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…
Answer: Create a Graph w/ Only the Genes Interaction
by
Antonio
• 0
Thank you all, I solved my issue by creating a for loop. Cheers!
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…
Comment: Trouble Installing DADA2 (warning: R new user)
by
shepherl
3.9k
As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…
Votes
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Comment: How to get the DMR?
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
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