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rbiopaxparser
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bug in nem's transitive.reduction? (and thus rBiopaxParser)
nem
graphs
rbiopaxparser
7.7 years ago
Ramon Diaz-Uriarte
▴ 70
0
votes
1
reply
1.2k
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Rbiopaxparser: how to extract a subnetwork from a pathway
Rbiopaxparser
updated 10.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 10.0 years ago by
Guido Leoni
▴ 200
0
votes
2
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1.3k
views
rBiopaxParser error
rBiopaxParser
rBiopaxParser
updated 11.3 years ago by
Dan Tenenbaum
★ 8.2k • written 11.3 years ago by
suzy.stiegelmeyer@syngenta.com
▴ 40
0
votes
4
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1.5k
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rBiopaxParser, Reactome and namespaces
rBiopaxParser
rBiopaxParser
updated 11.4 years ago by
Frank Kramer
▴ 60 • written 11.4 years ago by
Paul Shannon
▴ 470
0
votes
0
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1.2k
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BioPAX parsing
Pathways
Network
Rgraphviz
rBiopaxParser
Pathways
Network
Rgraphviz
rBiopaxParser
12.0 years ago
Frank Kramer
▴ 10
5 results • Page
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Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 20
Hi Maria, so what is the code you are using? By the 3rd way to conduct the analysis do you mean looking at the interaction model from part …
Comment: miRTarRnaseq library
by
María Calvo
• 0
Hello, in line with the previous questions, when the miRNA-mRNA interaction analysis is performed (3 rd way to conduct the analysis), I obt…
Answer: heatmap with batch effect
by
James W. MacDonald
67k
You have only one condition in the second batch, so it's not possible to remove the batch effect. You can probably adjust for it somewhat, …
Answer: how do I convert an Ilumn IDREF to a CPG loci
by
James W. MacDonald
67k
``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame with 865859 rows and 3 columns ch…
Answer: Which input data is acceptable for MAST?
by
Andrew_McDavid
▴ 270
Not too familiar with SCT v2. If it also has a point-mass at zero and the non-zero component is roughly-symmetric, then it might work ok w…
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Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Comment: Convert HGVS Representation back to Reference Genome Coordinates
Answer: How to control batch effect if Group and batch are same?
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