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DESeq2 raw

updated 2.2 years ago by swbarnes2 ★ 1.4k • written 2.2 years ago by Hicham ▴ 10

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.gpr raw Agilent MicroarrayData import

updated 3.3 years ago by Gordon Smyth 52k • written 3.3 years ago by irina.st.louis4 • 0

3

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CEL RAW geoquery readaffy

updated 10.3 years ago by Sean Davis 21k • written 10.3 years ago by PyPer ▴ 20

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Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.0k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current rel…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Comment: build samplesheet and plot profile by yf • 0

![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a

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Answer: Unable to install nloptr

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