Bioconductor R update

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bioconductor biocgenerics ubuntu package updates r update

7.4 years ago siinemselvi • 0

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clusterprofiler package installation r update

updated 7.9 years ago by tjiagoM ▴ 10 • written 7.9 years ago by klv2706w ▴ 10

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r update upgrade bioclite

updated 8.4 years ago by James W. MacDonald 68k • written 8.4 years ago by Lna • 0

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r update

updated 9.7 years ago by Martin Morgan 25k • written 9.7 years ago by filip.roudnicky • 0

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biocinstaller r update

9.9 years ago meeta.mistry ▴ 30

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upgrade r update

updated 10.0 years ago by Dan Tenenbaum ★ 8.2k • written 10.0 years ago by daniil.sarkisyan ▴ 10

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R update

updated 10.4 years ago by James W. MacDonald 68k • written 10.4 years ago by AJC ▴ 10

7 results • Page 1 of 1

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Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

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Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

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